Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00234 ATGGAAGGGTCTGGTATCGACCCCGACTCTCATAGAGCTGCTTCCACCAGTGGTAGTTCAAGAAGGTTTGGATTGTTAGCTGCCTCGAATATTATTCAGGCTCCACTTTCTGCTCTATTAGAGTATTCGGGTCTTCTTCGTGGCCGCCCAAGTCATCAAGAACCTGAGGCGTTGATAAGTGCACGACTGCCTTCGGCTTTTCGAGGCCATCTTCGCAGCCAGATTGACGAATCTTCAGGTGCCAATAATGATGGAGAGGTTTCGATTAGGATAATTGGGGCTGGGGAACCAGAACATGGGAGAGATGGTGCTGGACTAGTAGTTGGGCAAGCGAGGGAAGTCAGTGGTCGGAATGCAGTGTCTTCGCAATCTGTGACCTTGGCGTCGGAGCTTAGCCAGGGAGATTCTGCTACTGAACGCAGTGCTCGAGAGGGCATTCCTCAATCGAGAAACGCAGGCGCTGATGGGGATGCCTCGGAGGCAGCTGGGGGAAATAGCAGGGATTCTTCTTATCAAAGGTACGATATTCAACAGGCTGCTCGGGGGATTGAGCAGATTCTCCCATTTAGTTTTCTTCTACTGGTGGTCTTCATTCGACAGCATTTGCAAGGCTTCTTTGTGACAATATGGATTGCTGCTTTCATGTACAAGTCGAACGATATTTTGCGAAAACAAACAGCGTTAAAGGGGGAGAGAAAAATCTCTGTTTTGGTTGGCATATCTCTTGCATTCACCATTCATGTTATTGGTGTGTACTGGTGGTATCAAAATGATGGCCTTTTATATCCGCTGATCATGCTTCCTCCTCGAGCAATACCTCCTTTTTGGCATGCTATTTTCATCATCATGGTGAACGACACTTTGGTCCGCCAAGCAGTGATGGTGGTGAAGTGCATTCTATTGATGTATTACAAGAACAGCAGAGGCCGCAATTATCGTAAACAGGGTCAAATGCTAACTTTAGTCGAATATTTGCTACTACTGTACCGTGCGTTATTGCCCGCTCCTGTCTGGTATCGCTTCTTTTTGAACAAAGAGTACGGGAGTCTATTTTCTTCGCTATTGACGGGACTGTACTTAACTTTCAAACTCACATCTGTTGTTGAAAAGGTGCAATCCTTCTTTGCTGCTTTGAAAGCACTGTCACGTAAAGAGGTGCATTATGGGGCATATGCGACGTCCGAGCAGGTGAATGCAGCTGGTGATTTGTGTGCTATTTGCCAAGAGAAGATGCATGCTCCTATCCTACTCCGATGTAAACACATATTTTGTGAAGATTGTGTGTCAGAGTGGTTCGAGCGGGAACGAACATGTCCATTGTGTAGGGCTTTGGTTAAACCTGCAGATCTGAGGTCATTTGGTGATGGATCAACCAGTCTGTTTTTCCAGGTTTTCTAA 1398 46.49 MEGSGIDPDSHRAASTSGSSRRFGLLAASNIIQAPLSALLEYSGLLRGRPSHQEPEALISARLPSAFRGHLRSQIDESSGANNDGEVSIRIIGAGEPEHGRDGAGLVVGQAREVSGRNAVSSQSVTLASELSQGDSATERSAREGIPQSRNAGADGDASEAAGGNSRDSSYQRYDIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKISVLVGISLAFTIHVIGVYWWYQNDGLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVMVVKCILLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPAPVWYRFFLNKEYGSLFSSLLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVNAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 465
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3602639 3607966 - Carg19537-RA Car03g00234 144286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00234 465 ProSiteProfiles Zinc finger RING-type profile. 404 442 IPR001841 -
Car03g00234 465 MobiDBLite consensus disorder prediction 119 169 - -
Car03g00234 465 MobiDBLite consensus disorder prediction 119 145 - -
Car03g00234 465 ProSitePatterns Zinc finger RING-type signature. 419 428 IPR017907 -
Car03g00234 465 Pfam Zinc finger, C3HC4 type (RING finger) 402 445 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g00234 Car07g01160 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00234 Car-Chr3:3602639 Car04g00979 Car-Chr4:5653397 0 dispersed
Car03g00234 Car-Chr3:3602639 Car07g01160 Car-Chr7:7000942 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00234 - K22379 csv:101205267 846.269