Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00246 ATGAGGCTATCTTCCCTTTTTGCACCATTTTTACTCTTACTTTCCTTCATTGAGGCTGATCTAAACTCAGACAAGCAAGCTCTTCTCGAGTTTATTTCGACCGTTCCCCACGGTCGAAAAATCAACTGGGATCCCTCTACCCCGGTCTGCACGGCTTGGGTTGGCATCACGTGCACTTCCAACCTCTCTAATGTGCTCGCTCTCAGGCTGCCTGCTGTTGGACTGTTTGGTCCGATACCCGCCAATACACTTGGAAAGTTAGGCGCTCTTAGAACCTTGAGTCTTCGATCTAACAATCTTAATGGAAACGTTCCATCGGATGTGCTATCCCTTCCCTCCCTAAAGTTTATATATCTTCAACACAATAACTTTTCTGGTCAAATATCTTCTTCCCTGTCTCCTAGCCTTACCTTCCTCGATCTGTCGTTCAACTCTCTCACGGGAAACATTCCGACATCGATACAAAATCTCACGCAGCTCACTAGCTTCAATGTTCAAAACAACTCCCTGACCGGATCCGTTCCTGATATCGGTCACCTAAAGCTTAAACTATTGAACGTGAGCTACAACCGTCTTAGCGGTCGTATTCCCGCTTCACTGCAATCATTTCCTCCTTCTTCCTTTGAAGGGAACTCACTGCTATGTGGCTCACCTCTGAAAAATTGTTCACTTGGTGCTCCCTTACCTTCTCCATCTCCCACTTCTTCGACTCGGCCGAAGAACGAAAAGAGAATAAACATTGGAGCCATCGTTGCCATTGCCTTGGGTGGTTCTGCATTGCTCTTCCTCGTCACGATATTGATTGTCGTCTGTCGTATAAAGAAAAAGGATGGCGAAGTTAGTACCGTTGCTGCGAAAGGAAAGGGCAAAAGGAGTGAGCAACCAAAGGAGGATTTCGGAAGCGGGGTACAAGAGCCCGAGAAAAATAGGCTCGTGTTCTTTGAAGGGTGTTCGTATAACTTTGATCTCGAGGACCTGTTAAGGGCCTCCGCCGAAGTACTCGGAAAAGGGAGTTACGGGACTACTTACAAGGCGATCTTGGAGGATGGAATTACAGTGGTAGTAAAGAGGTTGAAGGAAGTGGTAGCTGGGAAGAAGGATTTTGATCAACAAATGGAGATTGTTGGGAGAATCGGTCAGCATCCGAACGTCGTGCCTCTCCGTGCCTATTACTACTCGAAAGACGAGAAGCTTTTAGTTTACGATCACGCCATTGCTGGAAGCTTTTCCTCATTACTCCATGGAAGCCGAGACGGTGGAAGAGGGCCACCGGACTGGGAAACACGAGTGAAGGTTTCACTTGGGTGTGCCAAAGGCCTTGCACATATCCATTCATCAAGTGGGGGAAAATTGATCCATGGCAACATAAAGTCCTCTAACATCCTTCTTACACAAGACATGAATGGTTGTATTTCAGATTTTGGCTTGACTCCTTTGATGAACTCTCCAATCATTCCCTCTAGAAGCGTAAGTTATCGTGCTCCAGAGGTGATCGAGACTCGAAAGTCAACTCAAAAGTCAGACATTTACAGTTTCGGAGTCGTTTTGCTCGAGATGTTGACTGGGAAAGCGCCATCCCAATCGCCTGGCCGTGACGATGTCATGGACCTTCCTAGATGGGTCCAATCTGTGGTTAGAGAAGAATGGACATCTGAGGTATTTGATGTAGAACTAATGAAGTATCAAAACATTGAAGAAGAGCTGGTTCAAATGCTCCAAATAGCAATGGCGTGTGTGTCACGAGTGCCAGATATGAGACCAACGATGGAGGAAGTTGTTAGGATGATCGAGGAAATCCGACCATCTGACTCGGGAACTCGACCATCATCAGAAGATAACAAGGACGGAGACGGGGATGGGGATGGAGACGATGACTTGAATACTCCGACCTGA 1893 46.86 MRLSSLFAPFLLLLSFIEADLNSDKQALLEFISTVPHGRKINWDPSTPVCTAWVGITCTSNLSNVLALRLPAVGLFGPIPANTLGKLGALRTLSLRSNNLNGNVPSDVLSLPSLKFIYLQHNNFSGQISSSLSPSLTFLDLSFNSLTGNIPTSIQNLTQLTSFNVQNNSLTGSVPDIGHLKLKLLNVSYNRLSGRIPASLQSFPPSSFEGNSLLCGSPLKNCSLGAPLPSPSPTSSTRPKNEKRINIGAIVAIALGGSALLFLVTILIVVCRIKKKDGEVSTVAAKGKGKRSEQPKEDFGSGVQEPEKNRLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTTYKAILEDGITVVVKRLKEVVAGKKDFDQQMEIVGRIGQHPNVVPLRAYYYSKDEKLLVYDHAIAGSFSSLLHGSRDGGRGPPDWETRVKVSLGCAKGLAHIHSSSGGKLIHGNIKSSNILLTQDMNGCISDFGLTPLMNSPIIPSRSVSYRAPEVIETRKSTQKSDIYSFGVVLLEMLTGKAPSQSPGRDDVMDLPRWVQSVVREEWTSEVFDVELMKYQNIEEELVQMLQIAMACVSRVPDMRPTMEEVVRMIEEIRPSDSGTRPSSEDNKDGDGDGDGDDDLNTPT 630
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3686194 3688458 + Carg19525-RA Car03g00246 144298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00246 630 ProSiteProfiles Protein kinase domain profile. 328 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00246 630 Pfam Leucine Rich Repeat 135 157 IPR001611 GO:0005515
Car03g00246 630 Pfam Leucine Rich Repeat 181 203 IPR001611 GO:0005515
Car03g00246 630 Pfam Leucine rich repeat N-terminal domain 22 58 IPR013210 -
Car03g00246 630 MobiDBLite consensus disorder prediction 616 630 - -
Car03g00246 630 Pfam Protein kinase domain 331 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00246 630 ProSitePatterns Protein kinases ATP-binding region signature. 334 365 IPR017441 GO:0005524
Car03g00246 630 MobiDBLite consensus disorder prediction 597 630 - -
Car03g00246 630 MobiDBLite consensus disorder prediction 597 615 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g00246 Car07g01169 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00246 Car-Chr3:3686194 Car20g00263 Car-Chr20:1527659 0 dispersed
Car03g00246 Car-Chr3:3686194 Car07g01169 Car-Chr7:7070982 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88705 PF00069 Pkinase 8.60E-36 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00246 - - csv:101210437 1044.26