Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00249 ATGAAGGAAATTCATAAGTTCCGTCTTGCATTTGCATTTGCATCGATCTCTGTTTTTGTTTGCTTGTTCTTCGATGTTCATGTGGTTTTAGCTGACAATTACGTTCCCCGGGATTTCATCCTCCTCGATTGTGGAGGGCCTTCGACTGCCAACGACGTCGATAATCGGAAATGGATGACCGATGACAAATCCAAGTTTATTCCAGCGAGGGGGAATAGCACCGTATCGAAAGCCGCTACCCAGGATCCTTCTGTTCCTGACATCCCTTTCATGACGGCTAGGGTTTTCAACTCTAATTTCACCTACAGCTTTCCTGTGGCCCCTAGTCGTTTATTCGTTCGTCTCTACTTTTACCCTTCTTCTTACAGTGGCCTTAATGCATCTGATGCTCTTTTCTCTGTCTCCACTCAATCCTATACCCTTCTTAAGAACTTCAGCGCTGCACAAACTGCCGAGGCTTTGAATTTTGCTTATATCATTAAGGAATACTCAATCTATGTTGAAGATGGATGGTTGAACTTGACTTTCGTTCCATCCTCCAGTCATCCAAAGGCCTATGCATTTGTGAATGGGATTGAGATTGTATCCATGGCTGATATTTACAGCGATACTTCTGGGACTCTTCTGGTTGTTGGCCCATCTACTCCATTCACTGTGGATAACACCACTGCGCTTGAGAATGTCTATCGGTTGAACGTCGGGGGCAATGATATTATGCCTTCCGGTGATACGGGAATGTATAGGTCTTGGTTTGATGACACACCATATTTGTATGGTGCAGCACAGGGAGTGACAATGACTACTGATCAGAACACAACGATTAATTATCCGCCGAGTATTCCTACTTATGTTGCGCCGGTTGATGTCTACTCCACTGCTAGAGCAATGGGACCTGATAACAATGTCAATTTGAATTATAACATGACATGGATATTGCCCGTTGACTCTGGGTTCTTTTACCTTGTTAGGCTCCATTTTTGTGAGGTTGCTGCAAATATCACAAAAGTCAACCAAAGAGTCTTTGACATTTACATCTTTAATCAAACTGCTATGGATGGTGCAGACGTGGTTGCCTGGGCTGGAAGTAACTATATCCCTGTGTACAAAGATTATGTGGTTTTCATTCCTAGTGGTGGAAGTCCACAGAAGGATTTATGGCTCGAACTGCATCCAGACAAGTCTATGGTCCCCAATTACTACGATTCAATCTTGAACGGAGTGGAGATATTCAAAGTCAGTGACTCAAATGCTAATCTTGCAGGGCCGAATCCTATTCCTGCGCCAAAACAGGAAATTATTGATCCATCATTAGCTAACCCAGCATCTTCTCATGGTAAATCGAAGAATAAGGCAGGGATCATTGCTGGAGTTGTTTGTGGAGTAGCTGCTTTAGCTCTGATCATTGGTTTCTTTGTTGTTGCTAAACGTCGCCGTGGACATGGGAAAGATTCTAGCTCGGTTGAAGGACCGTCTGGATGGCTCCCTCTTTCTCTCTATGGAAATTCCCATTCAGCTGGATCTGCTAAGACAAATACAACTGGAAGCTATACCTCCTCCCTGCCTTCCAACCTTTGCCGCCACTTCTCATTTTCTGAGATCAAGGCTGCCACAAGGGACTTTGATGAATCTTTACTACTTGGAGTGGGTGGTTTTGGAAAAGTTTATAAGGGAGTCATTGATGGTGGGACTACGGAAGTTGCCATTAAGCGTGGGAACCCTCTCTCCGAGCAAGGTGTGCATGAATTTCAGACCGAGATTGAAATGCTCTCTAAGCTTCGCCATCGCCACCTTGTGTCGTTGATTGGCTACTGCGAAGAGAATTGTGAAATGATCCTGGTTTATGATTGCATGGCTCATGGAACACTGCGAGAACATTTATACAAGACTCACAAGCCACCATTGTCTTGGAGGCAAAGGCTCGAAATATGCATTGGAGCTGCCCGTGGTCTGCATTATCTCCACACTGGTGCCAAGTATACAATTATTCACCGAGATGTGAAGACAACCAACATCCTTTTGGATGAAAAGTGGGTGGCAAAAGTATCTGATTTCGGGTTATCGAAAACGGGTCCTACATTGGATCACACTCATGTTAGCACTGTAGTGAAAGGTAGTTTCGGATACTTGGATCCTGAATACTTTAGGCGACAGCAATTGACTGACAAATCAGATGTTTACTCCTTCGGAGTCGTTCTCTTTGAGGTCCTATGTGCTCGGCCAGCCTTGAACCCAACACTCCCCAAGGAGCAAGTGAGTTTAGCTGAATGGGCTGCACACTGCTACATCAAAGGCATTTTAGATCAGATAATCGACCCATTCCTTAAGGGGAAGATTGCATCGGAGTGTCTCAAGAAATTTGCAGAGACAGCAATGAAATGTGTGTCTGATCAGGGCATCGACAGGCCATCGATGGGCGACGTTCTCTGGAATCTAGAGTTCGCATTGCAGCTGCAGGAGAGTGCCGAAGAGAGTGGCAAGCTAGGCAGCGGGATGGACATAGAAGAAGGTCAGCTCGATGTAGTTTACAAAGGAAAGAAGGATCTAGATGCTTCCCCAGGCATTGATGGAAACATAACCGACTCGAGAAGCACCGGAATCAGTATGAGCATCGGAAGCCGAAGCCTTGCCAGTGAAGATTCGGACGGCTTGACGCCCAGTGCTGTATTCTCACAGATCATGAACCCAAAAGGTCGTTAA 2697 45.35 MKEIHKFRLAFAFASISVFVCLFFDVHVVLADNYVPRDFILLDCGGPSTANDVDNRKWMTDDKSKFIPARGNSTVSKAATQDPSVPDIPFMTARVFNSNFTYSFPVAPSRLFVRLYFYPSSYSGLNASDALFSVSTQSYTLLKNFSAAQTAEALNFAYIIKEYSIYVEDGWLNLTFVPSSSHPKAYAFVNGIEIVSMADIYSDTSGTLLVVGPSTPFTVDNTTALENVYRLNVGGNDIMPSGDTGMYRSWFDDTPYLYGAAQGVTMTTDQNTTINYPPSIPTYVAPVDVYSTARAMGPDNNVNLNYNMTWILPVDSGFFYLVRLHFCEVAANITKVNQRVFDIYIFNQTAMDGADVVAWAGSNYIPVYKDYVVFIPSGGSPQKDLWLELHPDKSMVPNYYDSILNGVEIFKVSDSNANLAGPNPIPAPKQEIIDPSLANPASSHGKSKNKAGIIAGVVCGVAALALIIGFFVVAKRRRGHGKDSSSVEGPSGWLPLSLYGNSHSAGSAKTNTTGSYTSSLPSNLCRHFSFSEIKAATRDFDESLLLGVGGFGKVYKGVIDGGTTEVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDCMAHGTLREHLYKTHKPPLSWRQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDHTHVSTVVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPALNPTLPKEQVSLAEWAAHCYIKGILDQIIDPFLKGKIASECLKKFAETAMKCVSDQGIDRPSMGDVLWNLEFALQLQESAEESGKLGSGMDIEEGQLDVVYKGKKDLDASPGIDGNITDSRSTGISMSIGSRSLASEDSDGLTPSAVFSQIMNPKGR 898
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3698283 3700979 - Carg19522-RA Car03g00249 144301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00249 898 Pfam Malectin-like domain 42 412 IPR024788 -
Car03g00249 898 ProSitePatterns Protein kinases ATP-binding region signature. 546 569 IPR017441 GO:0005524
Car03g00249 898 Pfam Protein tyrosine and serine/threonine kinase 546 807 IPR001245 GO:0004672|GO:0006468
Car03g00249 898 MobiDBLite consensus disorder prediction 853 898 - -
Car03g00249 898 MobiDBLite consensus disorder prediction 856 891 - -
Car03g00249 898 ProSiteProfiles Protein kinase domain profile. 540 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00249 898 ProSitePatterns Serine/Threonine protein kinases active-site signature. 661 673 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00249 Car-Chr3:3698283 Car12g01100 Car-Chr12:10723567 0 dispersed
Car03g00240 Car-Chr3:3642283 Car03g00249 Car-Chr3:3698283 2.58E-20 proximal
Car15g00240 Car-Chr15:1340757 Car03g00249 Car-Chr3:3698283 0 transposed
Car03g00249 Car-Chr3:3698283 Car07g01172 Car-Chr7:7090046 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88706 PF12819 Malectin_like 4.10E-41 CL0202 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00249 - - csv:101211171 1628.22