Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00253 ATGGAGCTACATAATATTAATGATAACCCTGCAAGCTTTGAACTCTCCAGGGTCCAGGAGAAGTTACATAAGGCACAAAGAAGTCGTCATAAAAGTATACAGTTTGAGGATAATTTACAGCATGACGATAATCCAAGGTTGATATACATCAATGATCCAAGGAGAACTAATGATAAGTATGAGTTCACAGGAAATGAGATAACCACCAGCAAGTATACATTGATTACCTTCTTGCCGAAGAATCTCTTTATTCAGTTCCATAGGGTTGCCTATCTTTATTTTCTTGCTATTGCAGCTCTTAACCAGCTTCCACCTTTGGCAGTCTTTGGGAGAACGGTATCTCTTTTCCCCCTCCTGTTTGTGCTATGTGTTACAGCTATTAAAGATGGCTACGAGGATTGGCGTAGACATAGATCTGATCGTAATGAGAACAATAGACAGGCTCTTGTGCTTCAATCCGATGAATTCCGATTGAAAGTGTGGAAAAAAATACGAGCAGGTGAAGTTGTGAAGATCTGTGCAGACGAGGTCATTCCTTGTGACATGGTTTTATTGGGGACAAGTGATCCTAGTGGTCTTGCTTACATACAAACAATGAATTTGGACGGTGAATCAAACTTGAAGACAAGGTATGCTAGGCAGGAAACAGCATTTGCAGTAGCTGAGGGGTGTTCATATTCTGGTCTTATTCAATGTGAACAACCTAATAGGAATATTTATGAGTTCACTGCCAATATGGAGTTCAACAACCATAAATTTCCCCTCAGCCAGTCAAACATAGTCTTGCGTGGTTGTCAGCTGAAGAACACTGAATGGATTATTGGGGTGGTTGTCTATGCCGGACAAGAGACAAAAGCCATGTTAAACAGTGCAATGTCTCCTGCCAAGCGAAGTAAACTGGAGGGTTACATGAACAGGGAAACATTGTGGCTGTCAATCTTCCTCTTTGTCATGTGTCTAGTTGTGGCCCTTGGGATGGGGTTATGGCTTGTTCGGCACAAGGAACAGCTTGATACCTTGCCATATTATAGGAAAAGGTATTTCACAAATGGGGCCGACGATGGTAAGAAGTACAGGTTTTATGGAATACCTATGGAGACCTTTTTCTCCTTTTTGAGTTCTATTATAGTGTTCCAGATTATGATACCGATATCCCTTTATATTACAATGGAGATGGTGAGACTGGGGCAGTCATATTTCATGATTGAAGATAAGCACATGTACTGCAGAATCTCTTGCTCAAGGTTTCAGTGCAGATCATTGAATATCAATGAGGATCTTGGTCAAGTTCGCTACGTTTTTTCTGATAAAACAGGAACACTTACTGAAAATAAGATGGAATTTAAAAGAGCAAGTGTGTACGGGAAGAATTACGGGAACAACTTGACTGAGGGTTATTCATCAATGTATTCCATTCCAGCAACTATAGGGGGGAGGAGGAGGAAACTTAAATCTGAAGTTGCTGTTGATACTGAACTTCTCAAATTATTGCACAAGGACCTAAATGGAGAAGAAAAGATTGCTGCACATGAATTTTTTCTTACATTGGCTGCATGCAATACTGTAATTCCTATTCTCATGGATGACAAATCTAGTTATGAAAATGGTGAATTGCACGAGGATGTCGAAACTATTGGTTATCAGGGGGAATCCCCTGACGAGCAGGCACTAGTTGCTGCAGCCGCTGCTTATGGATATACCCTTTTCGAGCGCACATCTGGGCATATTGTTATAGATGTCAATGGTGAGAACTTAAGGTTGGATGTTTTGGGTTTACACGAGTTTGATAGCGTTCGCAAAAGAATGTCTGTTGTCATCAGATTCCCTGACAATACTATAAAGGTGCTGGTAAAAGGTGCCGATACTTCGATGTTGAGTATTTTAGGCAATGACTCTGATAGGGAAGAATTTATTAAGCATGCTACTCGACGCCATTTGAGTGAATATTCAATGGAAGGTTTGCGAACACTTGTAGTTGCTGCCAGAGACCTGAAAGATTCTGAATTTGAGCTGTGGCAGAGCAGATATGAGGATGCTAGCACTTCACTGACTGAAAGAGCAGTAAAACTACGTCAGACAGCAGCCCTTATAGAATGTGATCTAAAGCTTTTGGGTGCAACTGCTATTGAGGACAAGCTTCAAGACGGTGTACCTGAAGCCATTGAATCTCTTCGACAGGCTGGAATAAAGGTCTGGATTCTGACGGGAGATAAGCAGGAGACAGCCATATCAATTGGTCTCTCCTGCAAATTGCTGACTCCCGATATGCAGTCAATTATTGTCAATGGAAATTCCGAGTATGATTGCAGGAAACTTTTAGCTGATGCTATAGAAAAATATGGTATTAAATCAACACAGGGCAGAAGTCAAACACAGAAGATGAATTGTGAGAATGAACGCCATGATACACCAAAGACATCCGGTATGTCAGATTTTAATGAAGAGAAAGAAGAAGTGACCGATAAACCACTAGCTCTAATAATTGATGGAAACAGTTTGGTGTACATTTTGGAAAAGGAATTGGAGTCAGAGGCAAGAATCTTGTTATTACCTTTGAAATGA 2562 40.71 MELHNINDNPASFELSRVQEKLHKAQRSRHKSIQFEDNLQHDDNPRLIYINDPRRTNDKYEFTGNEITTSKYTLITFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRNENNRQALVLQSDEFRLKVWKKIRAGEVVKICADEVIPCDMVLLGTSDPSGLAYIQTMNLDGESNLKTRYARQETAFAVAEGCSYSGLIQCEQPNRNIYEFTANMEFNNHKFPLSQSNIVLRGCQLKNTEWIIGVVVYAGQETKAMLNSAMSPAKRSKLEGYMNRETLWLSIFLFVMCLVVALGMGLWLVRHKEQLDTLPYYRKRYFTNGADDGKKYRFYGIPMETFFSFLSSIIVFQIMIPISLYITMEMVRLGQSYFMIEDKHMYCRISCSRFQCRSLNINEDLGQVRYVFSDKTGTLTENKMEFKRASVYGKNYGNNLTEGYSSMYSIPATIGGRRRKLKSEVAVDTELLKLLHKDLNGEEKIAAHEFFLTLAACNTVIPILMDDKSSYENGELHEDVETIGYQGESPDEQALVAAAAAYGYTLFERTSGHIVIDVNGENLRLDVLGLHEFDSVRKRMSVVIRFPDNTIKVLVKGADTSMLSILGNDSDREEFIKHATRRHLSEYSMEGLRTLVVAARDLKDSEFELWQSRYEDASTSLTERAVKLRQTAALIECDLKLLGATAIEDKLQDGVPEAIESLRQAGIKVWILTGDKQETAISIGLSCKLLTPDMQSIIVNGNSEYDCRKLLADAIEKYGIKSTQGRSQTQKMNCENERHDTPKTSGMSDFNEEKEEVTDKPLALIIDGNSLVYILEKELESEARILLLPLK 853
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3721411 3724857 + Carg19518-RA Car03g00253 144305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00253 853 Pfam Phospholipid-translocating ATPase N-terminal 48 113 IPR032631 -
Car03g00253 853 ProSitePatterns E1-E2 ATPases phosphorylation site. 436 442 IPR018303 -
Car03g00253 853 MobiDBLite consensus disorder prediction 788 812 - -
Car03g00253 853 Pfam E1-E2 ATPase 145 392 - -
Car03g00253 853 MobiDBLite consensus disorder prediction 794 812 - -
Car03g00253 853 Pfam haloacid dehalogenase-like hydrolase 431 745 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g00253 Car07g01175 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00253 Car-Chr3:3721411 Car15g00499 Car-Chr15:2721592 0 dispersed
Car03g00253 Car-Chr3:3721411 Car07g01175 Car-Chr7:7105232 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00253 K14802 - csv:101206692 1518.44