Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00254 ATGATTGTTGGAATGATTCCTATCTTATGGCAGCTTTTTGAACTTGCAACTTCATGCAACGTTGTGCTATGCTGTCGTGTCGCTCCTTTGCAGAAAGCTGGAATTGTTGATCTGATTAAGAGTAGAACTGATGATATGACATTGGCAATTGGCGATGGGGCCAACGATGTCTCAATGATTCAGATGGCCGACGTAGGCGTTGGTATATGTGGACAGGAAGGGCGTCAAGCGGTAATGGCATCTGATTTTGCCATGGGACAATTTCGCTTTTTAAAAAGATTACTTCTAGTGCATGGACATTGGAACTATCAACGTGTAGGCTACATGGTTCTATACAACTTCTACCGCAATGCTGTTTTCGTCTTGATGCTCTTCTGGTACATTCTATGCACAGCATTCTCAACAACTTCAGCTTTGACTGATTGGAGTAGTGTGTTTTACTCTGTTATTTATACGTCTATCCCCACTATTTTTGTTGGTATTCTGGACAAAGACTTGAGTCACAAAACCCTACTCCAATATCCTAAGCTCTATGGTGCTGGCCATAGACAGGAGGCATACAATTTGCGTCTCTTTTGGTTCACAATGATTGATACCCTTTGGCAGAGTCTTGTTCTCTTCTATGTGCCATTGTTCATTTACAAGGAGAGTTCCATTGATATATGGAGCTTGGGAAGTTTGTGGACCATAGCTGTTGTTATCCTTGTGAACGTACACTTAGCGATGGATGTTCAACGTTGGGTATATATTACACATGCTGCAGTCTGGGGATCCATAGTCATAACGTACGCATGCATGGTGGTGTTGGATTCGATACCCGTTTTTCCTAATTACTGGACGATCTTTCATCTGGCTAAGTCCCCAACCTATTGGTTGTCTATATTGCTCATAATAGTTGTTGCATTGCTTCCACGCTATCTTTTTAAAGTTGTGCACCAAAGATTCTGGCCCTCGGATATTCAGATAGCCAGAGAAGCCGAGGTACTGAGAAAACGAAAAGGTCGTGAACAGTTTAATTCAAAGCAAGGTCGAGATTCCAATTAA 1044 42.05 MIVGMIPILWQLFELATSCNVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRVGYMVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVIYTSIPTIFVGILDKDLSHKTLLQYPKLYGAGHRQEAYNLRLFWFTMIDTLWQSLVLFYVPLFIYKESSIDIWSLGSLWTIAVVILVNVHLAMDVQRWVYITHAAVWGSIVITYACMVVLDSIPVFPNYWTIFHLAKSPTYWLSILLIIVVALLPRYLFKVVHQRFWPSDIQIAREAEVLRKRKGREQFNSKQGRDSN 347
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3724879 3727013 + Carg19517-RA Car03g00254 144306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00254 347 Pfam Phospholipid-translocating P-type ATPase C-terminal 78 318 IPR032630 -
Car03g00254 347 Pfam haloacid dehalogenase-like hydrolase 43 67 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00254 Car-Chr3:3724879 Car15g00499 Car-Chr15:2721592 1.72E-154 dispersed
Car03g00254 Car-Chr3:3724879 Car07g01175 Car-Chr7:7105232 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00254 K14802 - csv:101206692 657.521