Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00258 CTAAGAACAATGGCACAGCCTTCTGGGTATGCTGAAACAGACCCATCTGGTCGCTATGGACGGTTTAGAGAGATTCTCGGGAAAGGAGCGATGAAGACGGTATATAAAGCCTTTGATGAGGTGCTTGGGATTGAAGTGGCATGGAACCAAGTCCAGCTCAAAGATGTGTTCCATTCCCCTGAGGAACTACAACGTCTCTACTCAGAAGTTCATCTCCTAAAGAACCTCAACCACGACTCGATCATCCGATTCTACGCTTCTTGGATCGATACTCACCGTCGAACCTTCAACTTCATCACCGAAATGTTCACCTCCGGCAGCCTTAGAGAGTACCGACAAAAACATCGAAACATCAATATCGAAGCGATCAAGAACTGGGCTCGACAAATCCTACACGGCCTAGCTTATCTTCATGGACATGATCCTCCTGTAATCCATAGAGATCTTAAATGTGATAACATATTCATCAATGGCCATCTTGGGCAAGTTAAAATTGGTGACTTGGGACTTGCAACTATCCTTCATGATTCTCAACACGCTCATAGTGTCATAGGTACACCCGAGTTCATGGCACCGGAGCTGTATGATGAGGATTATAATGAGCTTGTAGATGTTTATTCGTTTGGAATGTGTTTGATTGAGATGCTCACTTTGGAGTATCCTTATAGCGAGGTGCCTGCCAAAGAGCTCTTGCTTGACCCATTTCTAGCTTCCAATAACAACAATGGCTCTCATCAAGAACACTTCTTGTGTTCATCACAAACTCCAAACAATTCAATGTCAAGAAGGACAGACATGGTCATTTCTGGATCAATGAATCCCAACGACGATACCGTTTTTCTAAAAGTGCATATCAAACTGAAGAACGGTAAAGCTAAGAACGTACACTTTGCTTTCGACACAATAAACGATACAGCTATCGACGTTGCGACTGAGATGGTTAAAGAGTTGGAAATCGGTGATTGGGACCCGAGTGAGATAGCTATGATGATAAAGAATGAGATATCCACATTGATACCCAATTGGGAGGAATATCATCAAGATAGCTTCAACTATGATGAACAAGAAGAAGACGGTGGCAACGACGACGATGACGAAAGCTACGTAACCCGACATCCTTTCTACTCGTGCTCCTCCCATGCCTCCTCCTCAAATTCTCTTGAGGGTTTCTACTCTTTCTATGAGGATTCCCATCATCATATATTGGATGGTGTGAATATTGATGATGATGATACAAGTTCTTCCTTCAATTACTCTGAAATAAGCTTTTGTTCAATCAATGAAGATGAGTATGGAAGAGATCCTCAATGCATATCAACCACCAAGAACCCTACAAGATTTTGCCCTACCATGAAGATAGACACGCACCATTTGAGGTATAAGGACACTAAAGTAATGGTGGATCGAGAAGCGTTCGAGAGACGATCCCGATCTGATAACTCAGCTAGACTTACGAGGGTGAAGTCAATGGTGAACCTCCGTAGCGAGGCGTTGCACCGATCGTTAGTCGAGATGTTGTTGAAGAAGCGATTGTTTAATACGGTGGATGCCATGGAGAATATTGGATACCAAAAGCCATAG 1581 43.26 LRTMAQPSGYAETDPSGRYGRFREILGKGAMKTVYKAFDEVLGIEVAWNQVQLKDVFHSPEELQRLYSEVHLLKNLNHDSIIRFYASWIDTHRRTFNFITEMFTSGSLREYRQKHRNINIEAIKNWARQILHGLAYLHGHDPPVIHRDLKCDNIFINGHLGQVKIGDLGLATILHDSQHAHSVIGTPEFMAPELYDEDYNELVDVYSFGMCLIEMLTLEYPYSEVPAKELLLDPFLASNNNNGSHQEHFLCSSQTPNNSMSRRTDMVISGSMNPNDDTVFLKVHIKLKNGKAKNVHFAFDTINDTAIDVATEMVKELEIGDWDPSEIAMMIKNEISTLIPNWEEYHQDSFNYDEQEEDGGNDDDDESYVTRHPFYSCSSHASSSNSLEGFYSFYEDSHHHILDGVNIDDDDTSSSFNYSEISFCSINEDEYGRDPQCISTTKNPTRFCPTMKIDTHHLRYKDTKVMVDREAFERRSRSDNSARLTRVKSMVNLRSEALHRSLVEMLLKKRLFNTVDAMENIGYQKP 526
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3787593 3790783 + Carg19513-RA Car03g00258 144310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00258 526 Pfam Protein kinase domain 24 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00258 526 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Car03g00258 526 ProSiteProfiles Protein kinase domain profile. 20 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00258 Car-Chr3:3787593 Car19g00278 Car-Chr19:3585697 0 dispersed
Car02g00510 Car-Chr2:3991606 Car03g00258 Car-Chr3:3787593 2.81E-159 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88709 PF00069 Pkinase 1.10E-46 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00258 K08867 - csv:101207665 792.341