Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00261 ATGGCGGTTTCTCCCCACTCTTTTCCGCCCAGAAAGCGGCGTCCCTCGGCGGCGGCATTCGTCTCCCCCAAACTCTCCGCCCCTATCCTCCTCGAATCTCTCCTCTCTCTCTGCCATGAAATCTCAGCCATCAAACCGCTTCAATTCATCCTCAAACGCTACTCCATTTCCATGATTCGGAAATCCAGATTACTCCACATTTTTCTCCAAGACCTCCGCCGTAATCCGACGGTTTTGCTTTCCGCCTCCGCCTTGCTCTGCCTTGAAGAAATGTATCTCGTTTTGCAAAGAATCAAAACCTTGATTGAAGATTGTTCTAATGGAAGCAAGATGTGGTTACTAACTCAGAACCAATCCATCGCTAACAACTTTCATGAACTCACCTTGGATTTATCGACTCTTCTTGATATCTTCCCTGTTAAGGACGCTGGATTAACCGAAGACGTCGAGGAATTGTTCTTCCTCTTGAGAAATCAGTGCTCCGAATCTGCTGCGTTTCTTGATCCAAGAGATGAAGATCTCCGATTGAGTGTGATGAACACGATCGATCGAATTAAAGATGAAATCGTTCCGGATTGTGCCGAACTGTCAGAGATTTTCTCCATGATCGATATTCGCGATTCGTCGAGTTGTCGTGAGGAAATCGAGAATCTCGAGGACGAAGTTCAGAATCAAACGGATGAGAAATCGAGATCCGATATGATTGCTTTGATCGGATTAGTTCGTTACGCGAAATGCGTTCTGTACGGAGCGTCGACGGCGGAATCTGGATTCCGCCGGAGTGATTCAATCTCGGATTTGCCTGTACCGGCGGATTTCAAGTGTCCGATTAATCTGGATTTAATGCAGGACCCTGTCGTCGTGGCAACAGGTCATACGTACGATCGTGCGGCCATAACGCTGTGGATTGAATCAGGGCACAACACGTGTCCAAAAACAGGTCAGACCTTGGCCCATACGAACCTAATTCCGAACCGGGGATTGAAAAACCTGATTGCGATGTGGTGCCGTCACGAGAGAATTCCGTTCGATGTAGCGGAAAGCAACAAAGAGAGAGTCAACGGCGTCACGTTAAACAAGGCGGCGTTAGAGGCTATGAGAATGACGGCATCATTTCTCGTTAAGAAGCTCGCCACGTCAGCAGACTCTTCAGTGAACGACGTCGTTTACGAGCTTCGTGTTTTGGCTAAAACAGATCCCGGAAGCCGTGGGTTCATCGCCCAAGCCGGAGCTGTACCGTTACTCATCCGTTACCTCAACTCCGATAACCCGACTCTGCAAGTTAACGCCGTCACGACGGTGCTCAACCTGTCTATTTTCGAAGCTAACAAATCGTTGATAATGGAGACCGACGGCGCGCTGATCGGAGTCGTCGAGGTACTCCGCTCCGGCGCCACTTGGGAAGCGAAAGGGAACGCCGCCGCCACCATATTCAGCCTCTCCAGTATCCATTCTTACCGGCGGAGAATGGGGAGGAAGAGTCGTGTCATAAGGGGACTGCTCGATTTGGCCAAAAACGGGCCGATTAATTCGAAGAGGGATGCTCTGGTGACCATTTTGGCACTAGCCAACGACAGGGAGATCGTCGGTCGGTTAATCGAAGGTGGGGTTATGGAGGCGGTGAGCCATCTGATGAACAGCCTGCCGGAGGAGGCGGTGACGATTCTGGAAGTGGTGGTTAGGAAAGGGGGATTTGTGGCGATTGCTTCTGGTTTTTATGTGATTAAGAAATTAGGCTCTGTTTTGAGAGAGGGCTCCGATAGAGCCAGAGAGAGCGCCGCCGCGGCACTGGTGACAATGTGCAGGCAAGGTGGATCGGAAATGGTGGCGGAGCTGGCGTCTATTGCTGGGATTGAGAGAGTGATTTGGGAATTGATGGGGAGTGGAACCGCGAGAGGGCGGCGAAAGGCGGCGTCGCTGTTGAGAATACTCCGGCGATGGTCAGCAGGTTTGGACGGAAACGGCGGCGCTGGAGGAGAGTCCATGACAATTACTTCGTCGAGAATTGGTGGCGACTCAAACCCCATTGTTAGTTCATCAAGAGGAGCAATTGTGCATGTGTAG 2064 50.97 MAVSPHSFPPRKRRPSAAAFVSPKLSAPILLESLLSLCHEISAIKPLQFILKRYSISMIRKSRLLHIFLQDLRRNPTVLLSASALLCLEEMYLVLQRIKTLIEDCSNGSKMWLLTQNQSIANNFHELTLDLSTLLDIFPVKDAGLTEDVEELFFLLRNQCSESAAFLDPRDEDLRLSVMNTIDRIKDEIVPDCAELSEIFSMIDIRDSSSCREEIENLEDEVQNQTDEKSRSDMIALIGLVRYAKCVLYGASTAESGFRRSDSISDLPVPADFKCPINLDLMQDPVVVATGHTYDRAAITLWIESGHNTCPKTGQTLAHTNLIPNRGLKNLIAMWCRHERIPFDVAESNKERVNGVTLNKAALEAMRMTASFLVKKLATSADSSVNDVVYELRVLAKTDPGSRGFIAQAGAVPLLIRYLNSDNPTLQVNAVTTVLNLSIFEANKSLIMETDGALIGVVEVLRSGATWEAKGNAAATIFSLSSIHSYRRRMGRKSRVIRGLLDLAKNGPINSKRDALVTILALANDREIVGRLIEGGVMEAVSHLMNSLPEEAVTILEVVVRKGGFVAIASGFYVIKKLGSVLREGSDRARESAAAALVTMCRQGGSEMVAELASIAGIERVIWELMGSGTARGRRKAASLLRILRRWSAGLDGNGGAGGESMTITSSRIGGDSNPIVSSSRGAIVHV 687
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3805432 3807495 - Carg19510-RA Car03g00261 144313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00261 687 MobiDBLite consensus disorder prediction 654 674 - -
Car03g00261 687 MobiDBLite consensus disorder prediction 659 674 - -
Car03g00261 687 Pfam U-box domain 269 339 IPR003613 GO:0004842|GO:0016567
Car03g00261 687 ProSiteProfiles U-box domain profile. 268 342 IPR003613 GO:0004842|GO:0016567
Car03g00261 687 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 410 452 IPR000225 GO:0005515
Car03g00261 687 Pfam Armadillo/beta-catenin-like repeat 401 438 IPR000225 GO:0005515
Car03g00261 687 Coils Coil 208 235 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g00261 Car07g01182 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00261 Car-Chr3:3805432 Car18g00408 Car-Chr18:2545138 1.20E-132 dispersed
Car03g00261 Car-Chr3:3805432 Car07g01182 Car-Chr7:7160467 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00261 - - csv:101205143 1144.8