Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00265 ATGGAGAGAGAGCGAGCGGCCAAATCCAATTTGGTTCGGGTTTTCGAGATTTCGCTGAAGCTCCGTTGCGTACATTCTCAATCTTCTAGCTGTTTTGCAGCTAATTTCATCAGATTCTTCTCGATTCCTCTTCGATTTCTTGCTCGGGATGCCAAATGGCCACGGCAGCTTTCAATGCAAGAGAACCTTACGTTTGTCATGGAGAACAAAGGGGCTATCTTGATGCAACGTTATGAATTAGGAAGGCTTCTGGGGCAGGGAACCTTTGCCAAGGTTTACCATGCTAGAGACATTAAAACTGGTGTGAGTGTGGCTATTAAAGTTATCGACAAGGAGAAGATCTTGAAGGTTGGGATGATCGATCAGATCAAGAGGGAGATCTCTGTCATGAGATTAATTAAGCATCCCAACGTAGTTGAGCTATATGAGGTTATGGCAACCAAAACTAAAATTTACTTTGTCATGGAATATGTCAAAGGGGGTGAGCTATTCAACAAGGTATCCAAAGGAAAGCTTAAAGAAGCTGTTGCACGGAAATATTTTTGGCAGCTGATCAGTGCTGTCGATTATTGCCACAGTAGAGGAATATGCCATCGAGATTTGAAACCGGAAAACTTACTGTTGGATGAACATGGTAACTTGAAGGTTTCTGATTTTGGGTTGAGTGCTCTTGCCGAATCTAAACGCCAAGATGGATTGCTCCATACTACCTGTGGAACCCCTGCTTATGTTGCTCCAGAAGTCATTAACAGGAGAGGTTATGATGGATGCAAAGCTGATATTTGGTCGTGTGGAGTGATTTTATTCGTTCTATTGGCTGGTTATCTCCCATTCCATGATTCTAATCTAATGGAGATGTATAAGAAGATTGGGAAAGGAGAATTTAAATTCCCCAACTGGTTTGCCCCAGAGGTGCGCAAGCTGTTGTCAAAGATTTTGGATCCTAACCCAAATACCAGGATTACTATTGCCAAAATAATGGGAAGTTCTTGGCTAAGGAGGGAGAGTGTGAAACCAAAAATTAATACCGAAGACGTGAAAGAAGTTGCTCCTTTGGATGTCGATACAATTTTCGTGTCTACGACTGAGGACAGGGATTCTGTCAGAGAGCTGAAGCAAGAAGTGGGAAAGCCATTGAATATGAACGCGTTTGACATAATCTCCTTGTCGTCAGGTTTCGATTTGTCAGGATTGTTCGAGGAGACTAATCAAAAGAAAGAAGTAAGATTCACATCGAACGAGTCTGCATCCACCATCATCTCTAAACTGCAAGACATTGCAAAGTGCCTGAAATTGAAAATCAAGAAGAAAGACAAAGGCGTACTGAAGATCGAAGGGTGCAAGGAAGGTCGAAAAGGAGCTGTATGTATTGATGCAGAGATTTTCGAGGTCACCCCATCATTCCATATTGTCGAAATGAAGAAGTCAAACGGAGATACTCTGGAATATCATAAGTTAATGAAAGACGATATAAGACCCGCCCTGAAGGACATTGTCTGGACCTGGCAAGGCGAGCAGCAACATAGACAGCTACCACAAGCAGAACAACAATGTCGAGAAGAAGCGCAACAACAGTCTTGTACCGATCAATTATATAACACGGGACTGTTGGAGGCTTCTCCTTAG 1626 42.74 MERERAAKSNLVRVFEISLKLRCVHSQSSSCFAANFIRFFSIPLRFLARDAKWPRQLSMQENLTFVMENKGAILMQRYELGRLLGQGTFAKVYHARDIKTGVSVAIKVIDKEKILKVGMIDQIKREISVMRLIKHPNVVELYEVMATKTKIYFVMEYVKGGELFNKVSKGKLKEAVARKYFWQLISAVDYCHSRGICHRDLKPENLLLDEHGNLKVSDFGLSALAESKRQDGLLHTTCGTPAYVAPEVINRRGYDGCKADIWSCGVILFVLLAGYLPFHDSNLMEMYKKIGKGEFKFPNWFAPEVRKLLSKILDPNPNTRITIAKIMGSSWLRRESVKPKINTEDVKEVAPLDVDTIFVSTTEDRDSVRELKQEVGKPLNMNAFDIISLSSGFDLSGLFEETNQKKEVRFTSNESASTIISKLQDIAKCLKLKIKKKDKGVLKIEGCKEGRKGAVCIDAEIFEVTPSFHIVEMKKSNGDTLEYHKLMKDDIRPALKDIVWTWQGEQQHRQLPQAEQQCREEAQQQSCTDQLYNTGLLEASP 541
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3839361 3842180 - Carg19506-RA Car03g00265 144317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00265 541 ProSiteProfiles Protein kinase domain profile. 78 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00265 541 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Car03g00265 541 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Car03g00265 541 Pfam Protein kinase domain 78 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00265 541 Pfam NAF domain 378 436 IPR004041 GO:0007165
Car03g00265 541 ProSiteProfiles NAF domain profile. 376 400 IPR018451 GO:0007165
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g00265 Car07g01185 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00265 Car-Chr3:3839361 Car13g00481 Car-Chr13:7049770 0 dispersed
Car03g01191 Car-Chr3:9389559 Car03g00265 Car-Chr3:3839361 2.73E-176 dispersed
Car08g00998 Car-Chr8:6865320 Car03g00265 Car-Chr3:3839361 1.84E-132 dispersed
Car14g00090 Car-Chr14:471022 Car03g00265 Car-Chr3:3839361 4.52E-47 dispersed
Car17g00172 Car-Chr17:1068128 Car03g00265 Car-Chr3:3839361 5.98E-130 dispersed
Car20g00276 Car-Chr20:1597906 Car03g00265 Car-Chr3:3839361 2.92E-162 dispersed
Car10g00919 Car-Chr10:6982102 Car03g00265 Car-Chr3:3839361 0 transposed
Car03g00265 Car-Chr3:3839361 Car07g01185 Car-Chr7:7195590 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88710 PF00069 Pkinase 1.30E-76 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00265 K07198 - csv:101209068 791.186