Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00305 ATGGAGAATTGTGATCGCCGTGCTTTTCTACACCGGCGGACGAATCGAATCGGCGTCAATGCGGAGGCAGCGGCGGCGGCGGATAGGTTTCCGGCGTGGAGCGTACCGGAGACGAAGGAACTGCTTGCGATAAGAGCGGCGCTGGATAGAAGGTTCTCGGAAATGAAACAGAATAGGATGCTTTGGATTTCGATCGCCGGTAAGATGAAGGCGAAAGGCTTTAATCGGAACGACGAGCAGTGCAAGTGCAAGTGGAAAAACCTCGTCACGCGCTATAAGGGGTGTGAAACTATGGATCCTAAAGCTTTCAAGCAACAATTTCCATTTTACGACGATCTCCACGCCATTTTCACCGCAAGGATGCAAAAGAATTGGTGGATCGAACCCGAAAACCGAGCGAAAGACTCGAAAAGGAAAGCCACGATTGAGCGGTTGTCTAGCGAGGACCCGAAAAGGGGAAAAAGGAGGAGAGAAGAAGATGAGAGAAGCAATTTGAAGGAAATAATGAAGGGGTTTGTGGAAAGAGAGAAGGAAATGGAGAGGCAATGGAGAGAAGCGTTTAGG 564 49.82 MENCDRRAFLHRRTNRIGVNAEAAAAADRFPAWSVPETKELLAIRAALDRRFSEMKQNRMLWISIAGKMKAKGFNRNDEQCKCKWKNLVTRYKGCETMDPKAFKQQFPFYDDLHAIFTARMQKNWWIEPENRAKDSKRKATIERLSSEDPKRGKRRREEDERSNLKEIMKGFVEREKEMERQWREAFR 188
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4103947 4105498 - Carg20001-RA Car03g00305 144357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00305 188 Pfam Myb/SANT-like DNA-binding domain 32 116 IPR044822 -
Car03g00305 188 MobiDBLite consensus disorder prediction 137 167 - -
Car03g00305 188 ProSiteProfiles Myb-like domain profile. 33 89 IPR001005 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g00305 Car06g00199 CCT
Car03g00305 Car14g00043 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00305 Car-Chr3:4103947 Car04g00549 Car-Chr4:3096901 5.19E-18 dispersed
Car14g00043 Car-Chr14:258742 Car03g00305 Car-Chr3:4103947 6.28E-51 wgd
Car03g00305 Car-Chr3:4103947 Car06g00199 Car-Chr6:1182338 3.65E-54 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3104 PF13837 Myb_DNA-bind_4 4.40E-18 CL0123 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00305 - - csv:101218250 258.07