Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00308 ATGGCTTCCCAATCCGAGCCATGGCTCATGGAAAACGGAACCCTTAAGCGCTTAACCAAGGAGAGTCGCCACGGCCATGGCCGAACTGCCCACAACTTGTCCTCCTCTTCCCTACGCAAAAAGTCCGATTTAACCCTCGTCTCCAAAATCCAATTCGGCTGTCTCCGCAAGTTCCTCATCAATCTCCAGGAGGTCATTTTGGGAACTAAACTTTCCATTCTCTTCCCTGCCATTCCCCTCGCTATTGTCGCTCAGAGTTTCGGGTTTGGAAGACCGTGGATTTTTGCTTTGAGCTTGCTTGGCCTCACGCCATTGGCTGAGCGTGTCAGCTTCCTGACCGAGCAAATCGCTTATTTCACCGGCCCAACAGTTGGGGGGCTTTTGAATGCAACATGTGGGAATGCGACGGAGCTGATAATTGCAATTCTGGCGCTCACACAAGGAAAGATAGACGTGGTGAAGTTCTCTCTTTTGGGCTCTGTTCTTTCCAACCTTCTTCTTGTTCTTGGCACCTCTCTCTTCTGTGGTGGCATCATTAATAAAGAGCAGAGTTATGACAGAGAAACCGAAGACGACGACGTTTCCGGAGAAGAGGCAGTGATCGGATTCTGGAGTGCATTTGCATGGCTTGCTGGAATGACACTTCTTATTGCTTTGCTGTCCGAATACGTTGTCAACACAATTGAGGAAGCATCTACTACGTGGGGTTTGTCGGTCAGTTTCCTTAGCATAATCTTGCTCCCTATCGTCGGAAATGCAGCCGAACACGCCGGGGCTATCATATTCGCCTTCAAGAATAAGTTGGACATATCTTTGGGAGTTGCATTGGGATCTGCAACACAAATTGCACTTTTTGTGATTCCACTGTGTGTGATAGTTGCTTGGACAATGGGAGTGGACATGGACCTGAACTTTAACCTCATGGAAACGGGGTCGCTTGGGTTGGCCATTATTGCCACGGCCTTCACTTTACAAGATGGAACCTCTCACTATATTAAAGGCCTCATTCTTCTCCTCTGCTACATTATCATTGCTGCTTGCTTCTTCGTTTCCAAGACCCAAGAAGAGTACACGGCCAGCGGCGAGTAA 1089 48.58 MASQSEPWLMENGTLKRLTKESRHGHGRTAHNLSSSSLRKKSDLTLVSKIQFGCLRKFLINLQEVILGTKLSILFPAIPLAIVAQSFGFGRPWIFALSLLGLTPLAERVSFLTEQIAYFTGPTVGGLLNATCGNATELIIAILALTQGKIDVVKFSLLGSVLSNLLLVLGTSLFCGGIINKEQSYDRETEDDDVSGEEAVIGFWSAFAWLAGMTLLIALLSEYVVNTIEEASTTWGLSVSFLSIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIALFVIPLCVIVAWTMGVDMDLNFNLMETGSLGLAIIATAFTLQDGTSHYIKGLILLLCYIIIAACFFVSKTQEEYTASGE 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4150213 4155647 + Carg19998-RA Car03g00308 144360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00308 362 Pfam Sodium/calcium exchanger protein 93 187 IPR004837 GO:0016021|GO:0055085
Car03g00308 362 Pfam Sodium/calcium exchanger protein 206 347 IPR004837 GO:0016021|GO:0055085
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g00308 Car07g01042 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00308 Car-Chr3:4150213 Car06g00609 Car-Chr6:3537668 1.84E-09 dispersed
Car03g00308 Car-Chr3:4150213 Car06g00205 Car-Chr6:1201779 1.05E-68 wgd
Car03g00308 Car-Chr3:4150213 Car07g01042 Car-Chr7:6032943 1.40E-96 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00308 K07300 - csv:101213857 479.559