Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00373 ATGGGTAATCATATTGGGAAGATTGGCCACTGCTTCGCCGGCGCCGGCGATATTTCCAGTCGTTATGGTCCTGCCGACATAATCTCCGACCGCCATGACGGCGGTTTTGGCCACTCCTTTTACTATCTCCCACCCGACCCACAAACCCTCTCCTCCTTCAAAGCTTTCCCGGATGACTACATCTCTCCAGCGACCATTTTCCGGTCGATTTCCGGCGCCTCTGTAAGCGCCAACGTCTCAACGCCGCTGTCCACGTCTCTGGTCGATCTATATCCTTATAGCACCACGTTTGATCGGGCGGCTGCTTTCGATTGCTCGAATTCCTTTGCCTCTGTGCCGCTACAGCCGGTGCCACGCCACTCGATGTCGGGAAATTTCGGTGGATTCCCTTCTTCGGGTCCAATGGAGAGAGGGTTCTTATCCGGACCCTTGGCCTCCCGGAGCATCGAATCGGGCCCGATAGATCGAGTGGTTTACTCCGGCTCGATTGAGAAGGGCGGCGGACCTGAGAAATTGCAGAGAAGCGTCTCTAACGGCGGCGTTGGAGATAGACAACCGAAATCGAAAAGAAGTCTCATTCGGGTTCTGAAGAGAGCCATATCCAAAACCATTTCTCGAAACCAGAAGGCTGCGAGTTCATACAAACATAATGAGAATGCAGCTCAGACTCAAAGCAGTGTTCATTTGAGCAGCCAGGCCAGTTTGGCGCAGGAAGACGATGGCGATTACTTTGTCGGCGGTCAGGGCGTACAGTGGGCACAGGGGAAGGCCGGTGAGGATAGAGTTCACGTGGTGATATCGGAGGATAATGGTTGGGTTTTTGTCGGAGTTTATGATGGATTCAACGGCCCTGATGCTCCTGATTACTTACTCGCTAATCTCTACACTGCCGTTCTCAAAGAGCTCAAGGGTTTGATATGGAATGATAAGTTCGATTCAACTGCAACCACGTCTTCCATGAACTCATCCAACTCTGCTTCAATTGAGGAAGACGATCATGGAACAACCCACATAAAAACTCAGGCTAATGTTCATCAACCTACAGAGAACTTTTCGGCAGAAAATAGGACGAGACAGCTGATGAAGAAGGGCGATCAGGATCCAAAGAATTGGAAATGGGAAAGGGAAAGGGAAAGCATAGGATTAGATCACCACAACATATGGGATGAATCAACAACAATCAATCATTCTGAGGTGTTGAATGCTCTGTCTGAAGCATTGAAAAAAACAGAGGAATCATATCTGCAGAATGCAGACAAGATGGCCACAAGAAATCCTGAGCTAGCTCTAATGGGTTCTTGTGTTTTGGTTATGTTAATGAGAGGAGAAGATGTGTACCTGATGAATGTAGGAGACAGCCGTGCAATTGTAGCGCAGCAACTCGAACCATACAGAGACCTGGAGAGAATCAATGAAGGAACACTACGAGTATTAGAATCCCCTGAAAGATTAACAGCCTTGGCTTCCCATCAGCTTACAATGGACCACAGCACGTACACAGAGGAGGAAGTTCAGAGGATCAAGAATGCTCATCCTGACGACCCTTCCGCAATTATGAATGACAGGGTGAAAGGTTATTTGAAAATCACACGGGCGTTTGGAGCTGGCTTTCTGAAACAGCCAAAGTGGAATGATGCATTGCTAGAGATGTTCAGAATAGACTATGTGGGAAATTCACCTTACATCACCTGTGATCCAACTCTGTGCCATTATAAACTCAGCCCAACCGACAGATTCTTGATATTGTCGTCTGATGGACTCTATCAATACTTTACAAATGAAGAAGCTGTTGCTCAAGTAGAGTCCTTCATTGCTTCTTTCCCTGAAGGAGATCCTGCTCAAAATCTCATTGAAGAAGTATTGTTTCGAGCAGCTAAAAAATATGGAATGGCCTTCCATGAGCTGCTTGATATCCCACAAGGGGAGCGGCGGAAGTACCACGACGACGTTTCAGTGATCATCATTTCCCTAGAAGGAAGAATTTGGCATTGGTTGATGTAA 2001 47.58 MGNHIGKIGHCFAGAGDISSRYGPADIISDRHDGGFGHSFYYLPPDPQTLSSFKAFPDDYISPATIFRSISGASVSANVSTPLSTSLVDLYPYSTTFDRAAAFDCSNSFASVPLQPVPRHSMSGNFGGFPSSGPMERGFLSGPLASRSIESGPIDRVVYSGSIEKGGGPEKLQRSVSNGGVGDRQPKSKRSLIRVLKRAISKTISRNQKAASSYKHNENAAQTQSSVHLSSQASLAQEDDGDYFVGGQGVQWAQGKAGEDRVHVVISEDNGWVFVGVYDGFNGPDAPDYLLANLYTAVLKELKGLIWNDKFDSTATTSSMNSSNSASIEEDDHGTTHIKTQANVHQPTENFSAENRTRQLMKKGDQDPKNWKWERERESIGLDHHNIWDESTTINHSEVLNALSEALKKTEESYLQNADKMATRNPELALMGSCVLVMLMRGEDVYLMNVGDSRAIVAQQLEPYRDLERINEGTLRVLESPERLTALASHQLTMDHSTYTEEEVQRIKNAHPDDPSAIMNDRVKGYLKITRAFGAGFLKQPKWNDALLEMFRIDYVGNSPYITCDPTLCHYKLSPTDRFLILSSDGLYQYFTNEEAVAQVESFIASFPEGDPAQNLIEEVLFRAAKKYGMAFHELLDIPQGERRKYHDDVSVIIISLEGRIWHWLM 666
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4557480 4559746 + Carg13809-RA Car03g00373 144425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00373 666 Pfam Protein phosphatase 2C 399 629 IPR001932 -
Car03g00373 666 ProSiteProfiles PPM-type phosphatase domain profile. 244 657 IPR001932 -
Car03g00373 666 MobiDBLite consensus disorder prediction 160 189 - -
Car03g00373 666 MobiDBLite consensus disorder prediction 207 232 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g00373 Car07g00975 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00373 Car-Chr3:4557480 Car05g01021 Car-Chr5:9756454 1.89E-39 dispersed
Car02g00580 Car-Chr2:4427611 Car03g00373 Car-Chr3:4557480 0 wgd
Car20g00353 Car-Chr20:1990725 Car03g00373 Car-Chr3:4557480 0 wgd
Car03g00373 Car-Chr3:4557480 Car07g00975 Car-Chr7:5534797 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00373 - - bhj:120069881 1149.42