Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00375 ATGGCTGAGAACGAGGACATCCAGCCTCTTGTCTGTGATAATGGAACAGGAATGGTTAAGGCTGGGTTTGCTGGGGATGATGCTCCAAGGGCTGTCTTTCCTAGCATTGTTGGTCGCCCTCGCCATACAGGTGTTATGGTTGGAATGGGGCAGAAAGATGCTTATGTTGGGGATGAGGCTCAGTCCAAGCGTGGTATTTTGACTCTCAAATACCCTATTGAGCACGGAATTGTCAGCAACTGGGATGACATGGAGAAGATTTGGCATCACACTTTCTACAATGAACTTCGCGTCGCTCCAGAAGAACATCCAATTCTTCTAACTGAGGCACCACTCAATCCCAAAGCTAACCGTGAGAAGATGACCCAGATTATGTTTGAGACCTTCAATGCACCAGCTATGTACGTAGCCATTCAAGCTGTTCTTTCCCTTTATGCCAGTGGTCGTACAACTGGCATTGTGCTAGATTCTGGAGATGGTGTCAGTCACACAGTCCCCATCTACGAGGGATATGCACTTCCGCATGCTATCCTACGTATTGATCTTGCTGGCCGTGACCTGACTGACGCCCTCATGAAAATTTTGACTGAGCGTGGTTATTCATTCACCACTTCAGCTGAGCGTGAAATTGTGAGAGATATGAAGGAAAAGTTGGCGTACATTGCCCTTGACTTTGAGCAAGAATTAGAAACCTCTAAGACCAGCTCTTCAGTTGAGAAGAGTTATGAATTGCCAGATGGTCAGGTGATTACCATTGGCGCTGAGCGTTTCCGATGCCCGGAAGTCCTTTTCCAGCCATCCATGATCGGAATGGAAGCTGCTGGTATTCATGAGACAACATACAATTCCATCATGAAATGTGATGTTGACATCAGGAAAGATTTGTATGGAAACATTGTGCTCAGTGGTGGTTCAACCATGTTCCCTGGAATTGCTGATAGAATGAGCAAGGAGATCACAGCCTTGGCCCCGAGCAGCATGAAGATTAAGGTGGTTGCGCCGCCTGAAAGGAAGTACAGTGTGTGGATTGGAGGTTCCATCTTGGCGTCCTTGAGCACTTTCCAGCAGATGTGGATTGCTAAGGCTGAGTATGATGAGTCTGGCCCCTCAATTATTGTTCATCTCGCCAAGAATCTGAATCGCCGTAGCCGCCATCAAGAGTTTGTGGGAGGTTCCTACTCCATTCTCGTTTACCGCACTGTTTCTGATCCGAACATGGACAAGATATTTCATGTACCTCAAGCTCAGAAATGCTGCAGTGGGAACTTCCGAAGTTGGGACCCGAAGATTTCAAATCCTCCTGGACTGTACGTTCTTATCTCTCTATTCTATGATTCTTTCAACTAG 1347 46.92 MAENEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRIDLAGRDLTDALMKILTERGYSFTTSAEREIVRDMKEKLAYIALDFEQELETSKTSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIIVHLAKNLNRRSRHQEFVGGSYSILVYRTVSDPNMDKIFHVPQAQKCCSGNFRSWDPKISNPPGLYVLISLFYDSFN 448
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4561210 4564849 - Carg13807-RA Car03g00375 144427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00375 448 Pfam Actin 5 373 IPR004000 -
Car03g00375 448 Pfam DIE2/ALG10 family 402 445 IPR016900 GO:0006488|GO:0106073
Car03g00375 448 ProSitePatterns Actins signature 1. 55 65 IPR004001 -
Car03g00375 448 ProSitePatterns Actins and actin-related proteins signature. 106 118 IPR020902 -
Car03g00375 448 ProSitePatterns Actins signature 2. 358 366 IPR004001 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00375 Car-Chr3:4561210 Car14g00382 Car-Chr14:1917891 0 dispersed
Car07g00973 Car-Chr7:5520936 Car03g00375 Car-Chr3:4561210 1.14E-16 transposed
Car02g00582 Car-Chr2:4437827 Car03g00375 Car-Chr3:4561210 0 wgd
Car20g00354 Car-Chr20:1994621 Car03g00375 Car-Chr3:4561210 0 wgd
Car03g00375 Car-Chr3:4561210 Car04g02545 Car-Chr4:20128173 0 wgd
Car03g00375 Car-Chr3:4561210 Car07g00972 Car-Chr7:5517379 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00375 K10355 - csv:101214246 732.25