Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00396 ATGGAATCCTTGCCTTATGCCCACGTTGATTCGAGCCTTCGAGCCCTCGCCGGTCAGGCCGAGGGTTTTGGCCGTTCTGCCATTGGTGGTCTTTATGGCTCTGTTTATTGTGTCACTAATTTAGCAGATGATGGTCCGGGATCGCTTAGGTTCGGGTGTCGTATGAAAGAGCCCCTTTGGATTATCTTTGAAGTTTCAGGCACAATTCACTTGTCGACATTTCTAAGCGTGTCATCGTATAAAACTGTAGATGGTCGTGGACAAAGGATAAAATTCACAGGAAAGGGATTGAGGCTGAAGGAATGTGAGCATGTGATCATTTGCAATTTAGAGTTTGAAGGTGGTAGAGGTCATGATGTTGATGGAGTTCAAATCAAGCCCAATTCAAAGCACATATGGATAGACCGTTGCAGCCTCCGAGACTATGATGATGGGTTGATTGATATCACCAGAGGAAGCACAGATATCACTATTTCTAGGTGTCACTTCTCACAGCATGACAAGACGATGCTCATCGGAGCCGATCCATCGCACGTTGGCGATCGATGCATTCGTGTCACTATTCACCACTGTTTTTTCGATGGTACTCGGCAACGGCATCCTCGTGTTAGATTTGCTCAAGTGCATCTATACAATAATTACACCAGAAACTGGGGGATCTATGCTGTCTGTGCTAGTGTAGAATCACAGATATACTCTCAGTGCAACATATACGAAGCAGGAGAGAAAAAGGTGGCATTTAGATATCTAACTGAAAAGGCAGCAGACAAGGAAGAGCCCTCAAGTGGGTGCATATGGTCCGACGGAGACTTGTTTGTAAATGACACACAAAGCGGGCTGTCGGCGCCAACCACCGGACCCAGCTCGTTTCATCCCTCACAACATTACACTGCCTGGACAGTGGAACCTCCAACGGATGCTCTGAAACAGATCCTCCAACTTTGTACTGGATGCCAAAACATCCAAAGCCCCACTGATCTGCCTCTTCTACCTTAG 996 46.79 MESLPYAHVDSSLRALAGQAEGFGRSAIGGLYGSVYCVTNLADDGPGSLRFGCRMKEPLWIIFEVSGTIHLSTFLSVSSYKTVDGRGQRIKFTGKGLRLKECEHVIICNLEFEGGRGHDVDGVQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHVGDRCIRVTIHHCFFDGTRQRHPRVRFAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGEKKVAFRYLTEKAADKEEPSSGCIWSDGDLFVNDTQSGLSAPTTGPSSFHPSQHYTAWTVEPPTDALKQILQLCTGCQNIQSPTDLPLLP 331
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4679153 4683035 - Carg13786-RA Car03g00396 144448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00396 331 Pfam Pectate lyase 75 237 IPR002022 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00396 Car-Chr3:4679153 Car03g00499 Car-Chr3:5130987 1.14E-53 dispersed
Car03g00396 Car-Chr3:4679153 Car07g00947 Car-Chr7:5353813 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00396 K01728 - csv:101219724 622.083