Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00452 ATGGCGGCTCCATATCCAGATGATTTCAAGTGCCCTATTTCTCTGGAGATAATGTCCGACCCTGTAATACTCTCCTCCGGCCACACCTTTGATCGTTCCTCAATCCAACGGTGGCTCGATGCCGGTCACCGGACTTGCCCAATCACCCAATTGCCCCTTCCTCAAAACCCTAATCTAATCCCTAACCATGCTCTCAGAAGCTTAATTGCAAATTTCAACCCTGTTTCACTGTCCAAGCCATTTCTCCCTCATCCCTCGCCCCAAACCCTAATATCGATTCTCATATCTCCTTCTTCCTCTCTCGATTCCAAGCTTGATTGCCTCAATCAACTCGCGAGGGTTTCGAAGCGCGATTCCGCTATGCGTCGAAGATTGACCGAGTCCGGGGCTGTCTCGGCTGTTCTTAAATGCGTTGGTTCTGACGATCCGAGGCTTCAAGAGAAGGGTCTGTCGCTGTTGCTGAATCTTAGTTTGGACGATGATAACAAAGTGGGTTTGGTTGCAGAAGGGGCTATTGGCCACACCGTGGCTGCTCTTCAAGCGAGGTCCCCCGATTGCAGAGCCGTTGCGGCCACGATACTGACGAGCTTGGCGGTTGTGGAGGTTAACAAGGCTACAATTGGGGCATATCCTCATGCGGTTCGCTCTCTGGTTTGTCTCTTACGGAACGGCAACTACAGAGAGCAGAAGGAAGCTGCAACTGCGCTTTACGCCATTTGTTCATTCCCCAGGAACCGTCTGCGGGCTGTGGAATGTGGGGTTGTTCCCATTTTACTCAAAATTGCCAATTCTGGGCTGGATAGAGCAGTGGAGGTTCTGGGGCTTTTGGCCAAGTGCAGGGAAGGTCACGAAGAGATGCAACGGTTCAAGGGATGTGTGGAGATTTTGGGTTGTGTTTTGAGAAATGGAGCCCCAAGAGGGGTTCAATATGCTCTTCTAACTCTGAGTTCCCTGTGCTGCCACTGCGAGCGACTGTGCGTGGAGGCCAGAAGAGAAGGCGTTTTGGGAATCTGTATCACATTGATTGATGACAATAATGAAAAGATCAGAGCAAATGCTGCAAATTTGATTCATATACTGCGCGGAAACAACATATGA 1098 50.18 MAAPYPDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITQLPLPQNPNLIPNHALRSLIANFNPVSLSKPFLPHPSPQTLISILISPSSSLDSKLDCLNQLARVSKRDSAMRRRLTESGAVSAVLKCVGSDDPRLQEKGLSLLLNLSLDDDNKVGLVAEGAIGHTVAALQARSPDCRAVAATILTSLAVVEVNKATIGAYPHAVRSLVCLLRNGNYREQKEAATALYAICSFPRNRLRAVECGVVPILLKIANSGLDRAVEVLGLLAKCREGHEEMQRFKGCVEILGCVLRNGAPRGVQYALLTLSSLCCHCERLCVEARREGVLGICITLIDDNNEKIRANAANLIHILRGNNI 365
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4961677 4962774 + Carg13730-RA Car03g00452 144504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00452 365 Pfam U-box domain 6 72 IPR003613 GO:0004842|GO:0016567
Car03g00452 365 ProSiteProfiles U-box domain profile. 4 79 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00452 Car-Chr3:4961677 Car13g00102 Car-Chr13:732289 4.92E-60 dispersed
Car03g00452 Car-Chr3:4961677 Car07g00243 Car-Chr7:1326806 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00452 - - csv:101213883 602.053