Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00466 ATGTTCTGTTTCCTCAATTACAGATCTTCGCCAGTTTCGTTGCTACTTCTGATTTCAATCTTTGGGCTTAGCCGCTCCCATCATTTCGAACCAAGATATAGGTTCCACATCTGTTCAGCGCCAAGTAATATCACAACCAACTCTAATCTGGGTTCAGATCTCATTGGCATACTGGGTTCTTTATCCGAAGCTTCCTCCGACAGCTTCTACAATAGAACTTTCAATGGAATGTACGGCCTCGTACTCTGTCGTGGAGATAGTCCCAACGATTACTGTCACAGTTGTGTCAGTACCGCAAGCAGAGATGTAAGGGATCGATGCCCTTTAAGAGTAAACGCCACAATATGGTACGATGAGTGCATGCTTAGATACTCAGACAAGAACTTCTTGGGAACCGTAGAGATCTCCCCGAGATTCCTCATGGGCGATTCAGGGAACCAGACATCGCCAGATGATAGTAATATTGATGGGTCTGCTCTGTTGTCTCAGATGGCCAGTGAAGCCTCAGTGTTACCGATGATGTACAAGGCAAACAAGTTGCATGGGACTGGCTATGGATTGGTTCAGTGCACAAGGGATCTCAACAGTAGCGCGTGTTGTAAATGTTTGATGGCTCTGTTGGAGGAGATCGGGCAGGTTTACAAAGGGAGAGTGGGGTGGAGAATTTTGAGCCCAAGTTGTAGCATAACGTATGAGAAATATCTTTTCTATTCTCTATCAGCTTCGCCTCAAGGATTGAGCACGAAAATGATTGCAGTAATCATTATATCAACAGTTGCAGCAGTAGCATTTCTTGCGAGTCTGTTGTATTGTTTACTTCTGTCAAAGAGAAGACAGCATCCAGAGATGGACACAGGTGAACAAGTTCTGTTGCGAAATTTGGGAGATGCTAAGTCTGCAGAATTGATGAAGCAAGATTTGCATTCAAGAGATGGAGACAATGATGAAGAGATGCATTACTTCAGTTTCATCACCCTACAGGCTGCCACAAACAACTTTGCAGATGCAAATAGACTTGGAGAAGGCGGGTTTGGCCCGGTTTTCAAGGGAAAGCTGATGAATGGGGAAGAAATAGCTGTAAAAAGACTGTCAGTGAAGTCAAGCCAAGGTCACGATGAGTTCAAGAATGAAGTCATGGTCATAATGAAGCTTCAACATAAAAATCTGGTCAAGCTTTTGGGATGCTGTCTGGAGGGAGAGGAAAAGCTCCTTGTCTATGAGTACATGGCAAACACTAGTCTAGATGCCTTATTATTTGATCCAGTTAAATGCAAACAACTCGATTGGCTTAAGCGCAACAACATCATCAATGGAGTTGCAAAAGGAATTCTATATCTGCACGAAGACTCTCGGCTAAAAATCGTTCATCGGGATTTAAAAGCTAGCAATGTGTTGTTGGATGATGAGATGAATGCAAAGATATCAGACTTTGGAACGGCCAGAATATTCGGAGGCAAGCAAGTTGAGGCTAGCACCAACAGGGTTGTTGGCACTTTTGGATACATGGCACCAGAATATGCAATGGAGGGAGTGTTTTCTGTAAAATCGGATGTTTATAGTTTTGGGATCTTAATGCTAGAAGTGATAAGCGGGAGAAAGAACAGCGGTTTCTTCAAAGTAGACAATGCACAAAGCCTTCTATCACAGGCATGGCAACTATGGAAGGAAGGCAGAGAAGAGGAAATGGTTGATCCGAACCTGGTTGGAGATTGTTCTTTAAGCGAAGCTCTAAGATGGATCCAAATCGGGCTCCTGTGCGTACAAGAAGACCCTAACATCAGACCGACCATGTCAATGGTCGTTCTAATGCTTGGAAGCAAATCGATTCCTCTTCCTCAACCGTCGAAACCTCCATTCTTTCCGATTGGCTTTCCGGCGTCCGCCGGTCAATCTTCAACGACCTTACTGGGAACGGGCTCAGAAACTTGCCCATCGTCTTCTTCCTTGCGCAAGTCCACGGTCTTCTGGGATCTGGACCGTATTAAACACAAGTCGTGA 1998 44.54 MFCFLNYRSSPVSLLLLISIFGLSRSHHFEPRYRFHICSAPSNITTNSNLGSDLIGILGSLSEASSDSFYNRTFNGMYGLVLCRGDSPNDYCHSCVSTASRDVRDRCPLRVNATIWYDECMLRYSDKNFLGTVEISPRFLMGDSGNQTSPDDSNIDGSALLSQMASEASVLPMMYKANKLHGTGYGLVQCTRDLNSSACCKCLMALLEEIGQVYKGRVGWRILSPSCSITYEKYLFYSLSASPQGLSTKMIAVIIISTVAAVAFLASLLYCLLLSKRRQHPEMDTGEQVLLRNLGDAKSAELMKQDLHSRDGDNDEEMHYFSFITLQAATNNFADANRLGEGGFGPVFKGKLMNGEEIAVKRLSVKSSQGHDEFKNEVMVIMKLQHKNLVKLLGCCLEGEEKLLVYEYMANTSLDALLFDPVKCKQLDWLKRNNIINGVAKGILYLHEDSRLKIVHRDLKASNVLLDDEMNAKISDFGTARIFGGKQVEASTNRVVGTFGYMAPEYAMEGVFSVKSDVYSFGILMLEVISGRKNSGFFKVDNAQSLLSQAWQLWKEGREEEMVDPNLVGDCSLSEALRWIQIGLLCVQEDPNIRPTMSMVVLMLGSKSIPLPQPSKPPFFPIGFPASAGQSSTTLLGTGSETCPSSSSLRKSTVFWDLDRIKHKS 665
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4999507 5002913 + Carg13716-RA Car03g00466 144518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00466 665 Pfam Salt stress response/antifungal 176 234 IPR002902 -
Car03g00466 665 Pfam Salt stress response/antifungal 42 126 IPR002902 -
Car03g00466 665 ProSiteProfiles Protein kinase domain profile. 333 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00466 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Car03g00466 665 ProSiteProfiles Gnk2-homologous domain profile. 32 129 IPR002902 -
Car03g00466 665 Pfam Protein tyrosine and serine/threonine kinase 337 602 IPR001245 GO:0004672|GO:0006468
Car03g00466 665 ProSiteProfiles Gnk2-homologous domain profile. 135 236 IPR002902 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00466 Car-Chr3:4999507 Car09g00824 Car-Chr9:5016207 3.02E-129 dispersed
Car18g00715 Car-Chr18:8355334 Car03g00466 Car-Chr3:4999507 6.86E-100 dispersed
Car19g00726 Car-Chr19:8250691 Car03g00466 Car-Chr3:4999507 1.11E-31 dispersed
Car03g00464 Car-Chr3:4995467 Car03g00466 Car-Chr3:4999507 6.49E-49 proximal
Car03g00465 Car-Chr3:4996480 Car03g00466 Car-Chr3:4999507 1.31E-14 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88717 PF07714 PK_Tyr_Ser-Thr 1.20E-46 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00466 - - cpep:111804043 1186.02