Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00473 ATGATCTCTTCACTTAGGCTCACATCTTCCAATCTCACTTCCTCTGAGTTTTTCAACAGAAAATCTCCAGTTCCATGGCCGAATCTTCCATTGCAATCCTCGGATTGCTGTGCTCTTAAGCATGTCGATCGATCTCTTTCTACCAACAAACCACTTCACATCTCATCCGTTGAGAATCTTTCTTTCCCCACAAAATCATCTCAGCGTTCGACGGTGTGCAAGGCGTATGAGGCTGAATCCCGACCTCTTCAGATTAACATTGAGCTTCCCGATGAACAGACGGCTCAGAAACTCAAAATTGGGCTCTATTTCGCCACTTGGTGGGCTTTGAATGTGGTGTTCAATGTCTATAACAAGAAGGTTCTTAATGCCTTCCCTTATCCATGGCTCACCTCCACTCTCTCCCTTGCGGCTGGATCGCTCATGATGCTTATTTCTTGGGCCACTAGAATGGTCGACGCTCCCAAAACCGATTTCGATTTCTGGAAATCCCTACTGCCGGTTGCAGTGGCGCATTCGATTGGGCATGTTGCAGCAACTGTGAGCATGTCCAAAGTCGCAGTCTCATTCACTCACATAATCAAGAGTGGGGAGCCAGCTTTCAGTGTGTTGGTGTCCAGGTTTCTATTGGGCGAGATGTTTCCATTGCCAGTTTACTTATCTCTTATCCCAATCATTGGAGGCTGCGCTCTTTCCGCCGTTACTGAGCTCAACTTCAACATGACCGGTTTCTCGGGAGCGATGATATCGAACTTGGCATTTGTGTTTAGAAACATATTCTCAAAGAAAGGGATGAAGGGAAAGTCAGTGAGTGGGATGAATTACTACGCTTGCCTCTCATTGCTGTCTCTGCTAATTCTTACTCCTTTCGCCATTGCTGTGGAGGGACCCAAGTTGTGGGCTGACGGATTCCAAAGTGCTCTCTCCCAAATTGGTCCCAATTTCATTTGGTGGTTGGGAGCTCAAAGTATGTTCTACCACTTGTACAACCAAGTGTCGTACATGTCTCTAGATCAGATATCGCCACTGACATTCAGCGTGGGTAACACAATGAAAAGAATCTTCGTAATAGTGTCGTCGATTATCATCTTCCACACTCCTGTCCGACCCATCAACGCCATTGGAGCTGCCATCGCAATCCTCGGAACCTTCATCTACTCTCAGGTACTACACCTTCTCCTCCGATCTCTTTCCCTTTCAGAACAAAGCGCAATTCTCATCTACGTATACTGTTTTCCCACAGGCAAAGCTGTGATTCAAGGAGATCGTCGTTGA 1275 46.67 MISSLRLTSSNLTSSEFFNRKSPVPWPNLPLQSSDCCALKHVDRSLSTNKPLHISSVENLSFPTKSSQRSTVCKAYEAESRPLQINIELPDEQTAQKLKIGLYFATWWALNVVFNVYNKKVLNAFPYPWLTSTLSLAAGSLMMLISWATRMVDAPKTDFDFWKSLLPVAVAHSIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGEMFPLPVYLSLIPIIGGCALSAVTELNFNMTGFSGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSLLSLLILTPFAIAVEGPKLWADGFQSALSQIGPNFIWWLGAQSMFYHLYNQVSYMSLDQISPLTFSVGNTMKRIFVIVSSIIIFHTPVRPINAIGAAIAILGTFIYSQVLHLLLRSLSLSEQSAILIYVYCFPTGKAVIQGDRR 424
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5048716 5050680 + Carg13709-RA Car03g00473 144525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00473 424 Pfam Triose-phosphate Transporter family 98 387 IPR004853 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00473 Car-Chr3:5048716 Car16g00851 Car-Chr16:6217793 1.21E-170 dispersed
Car16g00554 Car-Chr16:3501529 Car03g00473 Car-Chr3:5048716 5.49E-180 wgd
Car03g00473 Car-Chr3:5048716 Car07g00254 Car-Chr7:1384791 0 wgd
Car03g00473 Car-Chr3:5048716 Car09g00851 Car-Chr9:5210024 1.48E-97 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00473 K15283 K05350 csv:101216621 652.514