Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00485 ATGGCTTGCTCAGACTTTACAATGTGGGTATCCTCAAAATCGTCTTCATCCGATGACTCCGCTCTATCCTTTCGGCATTTTAACCCACTTCAAGTTCCTTTGCAAGGCTCTGCCTCGCGATCCTCATCTGTCACTCCGATTCATTGTGGCCTCCGTGAGCTTCGAGAACGGATCGATTCAGTGAAGAACACCCAGAAAATTACTGAGGCTATGAAGCTCGTTGCTGCTGCCAAAGTGCGTAGAGCTCAAGAAGCTGTTGTTAATGGAAGACCATTCTCGGAATCTCTAGTTGAAGTTCTTTACAACATCAACGAGCAGCTCCAAACCGAAGATATAGATGTTCTTCTTACAAACGTCCGACCGGTTAAGAAGGTTGCTTTGATTGTTGTAACAGGGGATCGTGGCCTCTGCGTAAGTTTCAATAACATGATCATCAAAAAGGCAGAGTCCAGAATCGCAGAATTGAAGACCCTTGGCCTTGATTATACGGTTATTAGCGTTGGCAAGAAGGGAAATTCGTATTTCCTTCGCCGGCCTTACATCCCAGTAGATAGATTTCTTGAGGGCGGTTCACTTCCCACAGCTAAAGAAGCTCAAGCCATTGCAGACGATGTTTTTTCCCTCTTTGTTAGCGAAGAGGTAGACAAAGTCGAGCTTCTGTACACCAAATTCGTGTCATTAGTTAAATCGGACCCTGTGATCCACACACTGCTTCCATTGTCCCCGAAAGGAGACATTTGTGATATAAATGGTGTTTGTGTCGATGCCGCAGAGGACGAGTTCTTCAGATTGACGACAAAGGAAGGAAAATTAACCGTAGAGAGAGATGCCGTGAGAACAAAAACCTCGGATTTTTCCCCAATTTTGCAGTTTGAGCAGGACCCAGTTCAGATTCTTGATGCTTTATTACCTCTCTATTTGAACAGTCAAATTTTGAGGTCATTGCAAGAATCATTAGGCAGTGAACTTGCGGCCAGAATGAGTGCCATGAGCAGTGCTACTGATAATGCAAGCGAGTCGAAGAAGACGCTCTCTATTGTCTACAACAGACAGCGTCAAGCCAAAATCACTGGCGAGATTTTGGAGATTGTTGCTGGCCCTCTGCATGAACCGAACATGGAGGGTTGA 1128 45.3 MACSDFTMWVSSKSSSSDDSALSFRHFNPLQVPLQGSASRSSSVTPIHCGLRELRERIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSESLVEVLYNINEQLQTEDIDVLLTNVRPVKKVALIVVTGDRGLCVSFNNMIIKKAESRIAELKTLGLDYTVISVGKKGNSYFLRRPYIPVDRFLEGGSLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGDICDINGVCVDAAEDEFFRLTTKEGKLTVERDAVRTKTSDFSPILQFEQDPVQILDALLPLYLNSQILRSLQESLGSELAARMSAMSSATDNASESKKTLSIVYNRQRQAKITGEILEIVAGPLHEPNMEG 375
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5080403 5083280 + Carg13697-RA Car03g00485 144537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00485 375 Hamap ATP synthase gamma chain [atpG]. 48 370 IPR000131 GO:0015986|GO:0045261|GO:0046933
Car03g00485 375 Coils Coil 51 71 - -
Car03g00485 375 Pfam ATP synthase 51 366 IPR000131 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00485 Car-Chr3:5080403 Car09g00794 Car-Chr9:4741420 6.30E-130 dispersed
Car13g00599 Car-Chr13:7758256 Car03g00485 Car-Chr3:5080403 0 wgd
Car18g00282 Car-Chr18:1655228 Car03g00485 Car-Chr3:5080403 3.85E-34 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00485 K02115 - csv:101218747 645.195