Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00493 ATGCAAACAAGAAAGAAGGTGTCCAAATCTTGTGATGCTCTTAGTAACCAACGACCAGCTGACCTATATACGAAAGAAGATGAGAGTGATGGTAAGAAAAGTAGAGGTTCTACAATGGGGAAGAAGAAGAAGCTGAGGCTGCAAAACCAAGGCTCCCATGTTATATTGGACAATGGATTGTTGGTGGTGACCATATCCAACCCCCAAGGCTATGTTAGTGGCATCAAGTATGGAAACATGGACAATCTGCTAGATGTCAAATCCAGCGAATCTAAAAGAGGATATTGGGATATCAACTGGAGTTGGCCTGGTGGCAAGGACAGATACCAATTGCTTAAGGGATCTGAGTTTAATGTCATCAACGCAACTGACGACACGATCGAGATATCGTTCAGGAAAGTTTTCAACCCATCAACTCGAGGCAACAAACTTCCACTTAGTGTAGACATAAGGTACATAATGAGGACTGGTATGCCAGGCTTCTACTGCTATGCAATCTACGAGCACCCATCGGCATGTCGGGCTTTCGATCTTGTTCAGACAAGAATGGTGTTTAAACTACGACAAGAAAAGTTCCACTACATGGCAATTTCAGACGAGAAGCAAAGAATAATGCCAATGCCAGAAGATTTGCATCCAGGAAGAGGTGAAGAACTAATTGTACCAGAGTCAGTTCTGCTTGTAAATCCCATTAATCCTGATCTGAAAGGAGAGGTAGATGATAAGTACCAATACTCAGTGGATAACAAAGATGGTGGAGTTCATGGATGGATTAGTTCCAGCCCAAACAACATAGGTTTCTGGGTAGTTTTTCCAAGCCATGAGTTCCGAAATGGTGGTCCAACAAAGCAAAATCTCACAGTTCATACCGGTCCTACATGTCTTGCTATGTTTCATGGAACACATTACATTGGAGAAGATATAATTACACATATTAAGGAAGGAGAGGCATGGAGGAAGGTGTTTGGTCCTGTTCTTGTATACCTTAACTCCACCTCAGATGTATCAGAGGCACACAATTTATGGATAGATGCAAAAGAACAGAGAATGCTAGAGGAAACAGCATGGCCATACAATTTTGTGTCTTCATCTTTTTATTTCAAGGAAAATGAACGTGGTTCCATTTCAGGAAGGCTGTTAGTCCAAGACAGGTTTATTTCAAGTTCCCCCATCCCTGCGAGAGATGCACATGTTGGTTTATCTGCTGCTAGAGAAGAAGGTGGCTGGCAAATAGAGAGCAAGGAATATCAATTTTGGGTGCAAACAGATTCCAATGGAGATTTCACTATCAGAAACGTTATTCCAGGAGTCTATGGACTTCACGGTTGGGTTCCTGGATTCATTGGTGATTATCTTCACCAATCACTAGTAACAGTATCTGCAGGATCTCATACCCATCTTGGCATTCTGACCTATAGTCCCCTCAGAGATGGTCCTACTGTTTGGGAGATTGGTTTTCCTGACCGAACAGCTGATAGCTTCTATGTTCCTGATGTGAATCCGATGTATGTCAACAAGTTATTTCTTCACAGCCCTGAAAAGTTCAGGCAATATGGTTTATGGGAGGGATACAGTGATTTACATCCAATAAATGACCAAGTTTTCACTGTGGGTATCAATGATCCGAAGAAAGATTGGTTCTTTGCTCAAGTTTGCAGAAGAGGGGAAGATGGTAAGTTTGTTGCGACAACATGGAGTATTAAGTTCAACATGACATCATTAACCGAAGGAACTTACCGGCTGAGGTTGGCGATTGCATCCGCCACACGCTCGGACTTGAAGATCAATGTCAACTCAATGGGGTCGGAGTCGTCACTGGTTTTCCAGCTGATGAATCTGGGAATGGATAACACAGTTTGCCGACATGGAAATCATGGACTGTATCGAAATTATAGTGTTGAGATTCCATCATCAATGCTTATTAAGGGAGATAACTCCATATTTCTGACGCAGGCAAGAGGTGGAGATGAACTCTGTGGACTTTTATACGATTATTTAAGACTGGAAGCACCTGATGATACTCCATCAAGTTGA 2034 42.33 MQTRKKVSKSCDALSNQRPADLYTKEDESDGKKSRGSTMGKKKKLRLQNQGSHVILDNGLLVVTISNPQGYVSGIKYGNMDNLLDVKSSESKRGYWDINWSWPGGKDRYQLLKGSEFNVINATDDTIEISFRKVFNPSTRGNKLPLSVDIRYIMRTGMPGFYCYAIYEHPSACRAFDLVQTRMVFKLRQEKFHYMAISDEKQRIMPMPEDLHPGRGEELIVPESVLLVNPINPDLKGEVDDKYQYSVDNKDGGVHGWISSSPNNIGFWVVFPSHEFRNGGPTKQNLTVHTGPTCLAMFHGTHYIGEDIITHIKEGEAWRKVFGPVLVYLNSTSDVSEAHNLWIDAKEQRMLEETAWPYNFVSSSFYFKENERGSISGRLLVQDRFISSSPIPARDAHVGLSAAREEGGWQIESKEYQFWVQTDSNGDFTIRNVIPGVYGLHGWVPGFIGDYLHQSLVTVSAGSHTHLGILTYSPLRDGPTVWEIGFPDRTADSFYVPDVNPMYVNKLFLHSPEKFRQYGLWEGYSDLHPINDQVFTVGINDPKKDWFFAQVCRRGEDGKFVATTWSIKFNMTSLTEGTYRLRLAIASATRSDLKINVNSMGSESSLVFQLMNLGMDNTVCRHGNHGLYRNYSVEIPSSMLIKGDNSIFLTQARGGDELCGLLYDYLRLEAPDDTPSS 677
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5101912 5105102 - Carg13689-RA Car03g00493 144545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00493 677 MobiDBLite consensus disorder prediction 21 36 - -
Car03g00493 677 MobiDBLite consensus disorder prediction 1 46 - -
Car03g00493 677 MobiDBLite consensus disorder prediction 1 17 - -
Car03g00493 677 Pfam Polysaccharide lyase family 4, domain II 395 466 IPR029413 -
Car03g00493 677 Pfam Rhamnogalacturonate lyase family 44 239 IPR010325 -
Car03g00493 677 Pfam Polysaccharide lyase family 4, domain III 480 668 IPR029411 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00493 Car-Chr3:5101912 Car09g00530 Car-Chr9:2983546 0 dispersed
Car03g00493 Car-Chr3:5101912 Car12g00194 Car-Chr12:1225621 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00493 K18195 - csv:101220336 1232.62