Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00499 ATGGCTTCCCCATTGTTGTCCCTCTTCTTCCTCGCTACAATTATCCGCCTCCCTTCACCGTCCACGGCCTACTCCAACAGCTACACCAAACTAGCCCTCAATCCCATTGACGCATGCTGGAGGACAAACCCCAACTGGGCGGCCAACCGCCGCGCCCTCGCAGACTGCGCCGTCGGGTTTGGCAGTGACGCATTGGGAGGCAAATTCGGGTCAATCTACGTGGTCATAGACCCGTCGGACGACCCGGAATACCCGAAGCCCGGAACGCTGCGTTTTGGGGTGATTCAAGCCGAGCCATTATGGATTGTATTCGCAAGAGATATGGTGATTACACTGGAAAGGGAACTGATGGTGAACAGCTTCAAGACCATTGACGGGCGAGGGGCTAAAGTGGAAATTGGCAATGGGCCATGCATTACCATCCAAAACGTGAGCCATGTCATAATCCACGGCATCACCATCCGTGACTGTAAGCCGGCCAAGCCTGGGCGCGTGAGGAGCTCAGTCACCCATTGTGGAGACCGCCAACAGTCCGATGGTGACGCCATTTCTGTATTCAGTTCTTCCCATATTTGGATCGACCATTGCTCCTTGGCTAGCTGCACTGACGGCCTCATTGACGTCATCCATGCTTCCACTGCCGTCACCATCTCCAATAATTACTTCTCTCAACATGATAAAGTGATCCTTCTCGGACACAACGATGAATTTACAGCTGATCGAATTATGAGAGTGACCGTAGCCTTCAATCGTTTTGGCGACGGGCTTGTTCAAAGAATGCCAAGGGTGAGATTTGGGTATGCCCATGTGGCCAATAATTGGTACCATAAGTGGGAAATGTACGCTGTGGGTGGCAGTGCAGATCCAAAAATCTTCAGCCAAGGAAACTACTTTGATGCTCCTGATGATTCATCCTCAAAGCAGGTTACAAAGAGAGAGGTTTATGTGAATGGATGGAAGAAGTGGAAATGGAGGTCTTCAAATGATGTGTTTGTGAATGGGGCTTATTTCATCCCATCTGGGTGGGGGTCTTGTACGCCTATCTACACTCGAGATCAAGCTTTTCCTGTGGCTCATGGCTCTTTGGCTCCTCTTTTGACTGATAGCGCTGGTGCTTTGAGTTGTGTTGTTGGTAAAGCTTGTTGA 1146 50.52 MASPLLSLFFLATIIRLPSPSTAYSNSYTKLALNPIDACWRTNPNWAANRRALADCAVGFGSDALGGKFGSIYVVIDPSDDPEYPKPGTLRFGVIQAEPLWIVFARDMVITLERELMVNSFKTIDGRGAKVEIGNGPCITIQNVSHVIIHGITIRDCKPAKPGRVRSSVTHCGDRQQSDGDAISVFSSSHIWIDHCSLASCTDGLIDVIHASTAVTISNNYFSQHDKVILLGHNDEFTADRIMRVTVAFNRFGDGLVQRMPRVRFGYAHVANNWYHKWEMYAVGGSADPKIFSQGNYFDAPDDSSSKQVTKREVYVNGWKKWKWRSSNDVFVNGAYFIPSGWGSCTPIYTRDQAFPVAHGSLAPLLTDSAGALSCVVGKAC 381
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5130987 5132505 - Carg13683-RA Car03g00499 144551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00499 381 Pfam Pectate lyase 116 298 IPR002022 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00396 Car-Chr3:4679153 Car03g00499 Car-Chr3:5130987 1.14E-53 dispersed
Car03g00499 Car-Chr3:5130987 Car13g00617 Car-Chr13:7884129 9.62E-147 dispersed
Car07g00947 Car-Chr7:5353813 Car03g00499 Car-Chr3:5130987 6.08E-52 dispersed
Car13g00610 Car-Chr13:7838479 Car03g00499 Car-Chr3:5130987 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00499 K01728 - csv:101210816 674.47