Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00524 ATGGGCATGGAATTGAGAAACTACAAGCTTGTTAGGTTTTATTCTGATCACAAAAAGCATAAGGAATCTGCCATTGGAAGCAGCAACAATGAAGCAATGCAACTTGAGAAGTCATCATCAAAATACTATATTCCGTCGTCTACATTCTTAATGCCTGACAATGGACTAGGGGGAATCAAAAGTAAATTCACTGAAACTTTTAAAACTGAGAAGTCGAAGGTGTTTCCGGAGGACTATGAACCATGGAGCAAAAGAATACTAGACCCTGGTAGCAAGATTGTTTTGAAATGGAACCGAGTGTTCATATGTTCGTGCTTATTGGCACTCTTTGTCGACCCGCTATATCTTTACTTGCCTGCTTTTAATGGGAATGGGCAATCCCAATGCGTGAGGACGGACTGGAAATTGCGAATTGTTGTGACCTGTTTCCGGACTGTTGCAGATTTTTTCTATCTTCTGCACATGATTATAAAGTTTAGAACAGCTTATGTTGCTCCTAGCTCTCGAGTTTTTGGGAGAGGTGAGCTTGTGATGGATCCAAAGATGATAGCAAAGAGTTCCGAGCTTGCTTGTGCGCACTTCAACTATTCTCATGAGACACCTAACCCTACTACATTTGATTGTCAAAGACTTGTAACTGCCTCTTCCATGCAGATTGTCATCTGGTTCATCATACCTGCAACAAGGAGTCGTCTAACGGATCATAAAAACAATGCTCTTGCACTTATTGTTCTGCTTCAATATATTCCGAGATTGTATTTGATTTTCCCATTAAGTTCAGAAATCATCAAAGCAAATGGAGTTGTTACAAAGACAGCTTGGGCAGGCGCTGCTTATAATCTTCTACTCTATATGTTGGCTAGCCATGTTTTAGGTGCTACATGGTATTTGCTGTCGGTTGATAGATATACGTCATGCTGGAAATCATTTTGTAGGAAGAAAGAATACAATACACTGGAATGCAACCTAACTTTTTTTGATTGCGATACATTTAACCATAATGACCGCGATACATGGGCAAATAGTACACTTGTTTTTGAAAAATGTGGCCCGAAAGGAATTTTCAAGTATGGCATTTTTGGGCAAGCAATGTCGAAGAATGTCGTCTCTTCAAGCTTTATTGAAAAGTACTTCTATTGTTTGTGGTGGGGCTTGCAAAACCTG 1164 39.78 MGMELRNYKLVRFYSDHKKHKESAIGSSNNEAMQLEKSSSKYYIPSSTFLMPDNGLGGIKSKFTETFKTEKSKVFPEDYEPWSKRILDPGSKIVLKWNRVFICSCLLALFVDPLYLYLPAFNGNGQSQCVRTDWKLRIVVTCFRTVADFFYLLHMIIKFRTAYVAPSSRVFGRGELVMDPKMIAKSSELACAHFNYSHETPNPTTFDCQRLVTASSMQIVIWFIIPATRSRLTDHKNNALALIVLLQYIPRLYLIFPLSSEIIKANGVVTKTAWAGAAYNLLLYMLASHVLGATWYLLSVDRYTSCWKSFCRKKEYNTLECNLTFFDCDTFNHNDRDTWANSTLVFEKCGPKGIFKYGIFGQAMSKNVVSSSFIEKYFYCLWWGLQNL 388
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5255998 5258400 - Carg28211-RA Car03g00524 144576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00524 388 Pfam Ion transport protein 97 387 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00524 Car-Chr3:5255998 Car01g01198 Car-Chr1:11081202 1.25E-126 dispersed
Car03g00524 Car-Chr3:5255998 Car14g00583 Car-Chr14:3167288 1.29E-110 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00524 K05391 - csv:101218643 647.891