Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00527 ATGGCAACCTCATGTTTTGGTTCACTTTGGATTCGAAAATCAAAGAGCAAACCCTTATCAACACCTTCCTCATTGAAATCCCAGAAGAATTCCGAAATGGAAAATATGGAAAGAAGAAGATTTGATAGCTTGGAATCATGGTCGATGATCTTAGAGTCCGACAATGTCGAAACTTGGGAGACATCGAAAGAGGATCAGGAAGAATGGACCGCTGATCTATCTCAACTCTTCATCGGTAACAAATTCGCCTCCGGTGCTCACAGTCGAATATACCGTGGAATTTACAAACAGAGAGCCGTCGCTGTTAAGATGGTTAGAATCCCAAACCAAAACGAGGAAACCAGAGCCAAACTCGAGCAACAATTCAAGTCAGAAGTCGCCTTGCTTTCTCGTCTCTTTCATCCCAACATAGTTCAGTTCATTGCAGCCAGTAAAAAGCCGCCGGTATACTGCATAATTACAGAGTATATGTCACAAGGTACTCTGAGAATGTATCTAAACAAGAAAGAGCCATATTCACTCTCAACAGAAACAATTCTAAGGTTAGCTCTTGACATATCAAGAGGAATGGAATACCTTCATTCCCAAGGAGTAATCCACAGAGACTTGAAATCAAACAACTTGCTTTTAAACGATGAAATGAGAGTAAAAGTAGCCGATTTTGGAACCTCCTGCCTCGAAACACAGTGCCGTGAATCGAAAGGCAACATGGGAACTTACCGATGGATGGCGCCGGAGATGATCAAGGAGAAGCCATATACACGGAAAGTTGATGTTTACAGCTTTGGGATTGTGCTGTGGGAGCTCCCACGGCTCTGCTTCCGTTTCAAGGGTGACCCCTGTTCAGGCTGCCTTTGCCGTCGCCGAGAAGGCGCCGCCGTTACCGGCGAGTTTGAACATTGTGGTGGCTTTGGAGAATACGACGAGTGTGTGAAACGAGGGTCTTCGCGCTTGCACATCATAGAAGATCTGGTAAACCGAAACGCCATTATTGAACGCTTCAAAATGCTTGTACCGCTGTGTACTCAAGCGCGTCTTCAATACCTGTACATGCCTGAGCCGCCATAG 1068 45.32 MATSCFGSLWIRKSKSKPLSTPSSLKSQKNSEMENMERRRFDSLESWSMILESDNVETWETSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQNEETRAKLEQQFKSEVALLSRLFHPNIVQFIAASKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETILRLALDISRGMEYLHSQGVIHRDLKSNNLLLNDEMRVKVADFGTSCLETQCRESKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELPRLCFRFKGDPCSGCLCRRREGAAVTGEFEHCGGFGEYDECVKRGSSRLHIIEDLVNRNAIIERFKMLVPLCTQARLQYLYMPEPP 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5281167 5282448 + Carg00487-RA Car03g00527 144579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00527 355 MobiDBLite consensus disorder prediction 15 35 - -
Car03g00527 355 MobiDBLite consensus disorder prediction 15 30 - -
Car03g00527 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Car03g00527 355 Pfam Protein tyrosine and serine/threonine kinase 78 271 IPR001245 GO:0004672|GO:0006468
Car03g00527 355 ProSiteProfiles Protein kinase domain profile. 76 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00527 Car-Chr3:5281167 Car07g00289 Car-Chr7:1505471 1.02E-180 dispersed
Car03g00527 Car-Chr3:5281167 Car03g00517 Car-Chr3:5208374 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88721 PF07714 PK_Tyr_Ser-Thr 1.30E-51 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00527 - - cmo:103484647 529.635