Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00543 ATGATCCGCCATATAAACCCTGATGGCCCTCCGCGGGCTCCTTTATTTGTCGTCGCCTTCTCCAGATGTTGTTTACAGTTCCGTTTGCAATTGCATAACTTGTACAGCAAGCGTTTCAGTTTTTTAGCTCTCTTCGATCAAGGAAATACTGAAAACTTCATCATTTTTCTCAAATTTGAGGATTCTTTTATTCCACTCCTTGTAAAGAGGGAAATTATATCAGCTACTGCAAATCATATAGGAGTTTTGAGTCCTAAAATATCTGCAGAGGGGAATAGCCAGGCATCGTCTGGGATCCATGAGATGCATCACCAGTCTGTGCAAAAGATAGATCCCTACTATTTATCACATTTACACATATTGGAAAACAATGTTTCTCCTGACGCAAGCAGCCAGGGAAACAGTGTTAACTTTTCTTCCTTTAAGGATCAGTTCTTTACTCTGGAATCATTTCCGGCTACTGCTGATCTGAGTGCCTGTAATTCCCCTTCTGCTGTAAGTGGTCTGTCTTCCAGGAGCCCCTTCTCACCTCAAGGTTCTCAATCATGCTCCTCAGATCAACCCCATTCCTTTGACAACACATGCGGATCACCACAAAGTGGATGCTCAGTGACTGATGATGATAACGAATTAAAGTACAAGCTGAAAGAATTAGAAATTTCTTTGCTGGGGCCTGAATCTGATATTGTGGATAGCTGCTACTGTTCTTTCAGGGGTGGGGCACATCAAGATGCTTCAGTAGCAAGGTGGAACTGGAATCAAGTGGCTGAGATGATTCCTAGACTTAACCTTCGGGATACGCTCATCCATTGTGCCCAAGCAATTCATGATTCTGATCTAAATGTGGCAACCTTATTTATGGATGTTTTAGGGAAGATGGTTTCTGTCTCTGGTGATCCAGCCCAGAGGTTGGGCGCTTACTTGTTGGAAGGGCTTAGAGCGAGGTTGGAACGATCTGGGAGTGCAATATACAAGGCCCTAAAATGCGAAGAACCAACAAGCTCTGAACTCATGTCCTACATGTCTGTTCTATTCCAAATCTGCCCGTACTTTAAATTTGCTTACACCTCTGCCAATGCTATCATTTGGGAGGCCATGGTAAATGAACCGATAATCCACATAATTGATTTCCAAATCGCACAGGGTAGTCAGTATATACCTCTCATCCATGATCTTGCCAATCGGCCTGGTGGCCCTCCAGTTCTTCTACGCATCACAGGTGTGGATGATTCCCAATCATCTCATGCACGAGGAGGGGGACTTCAAATTGTGGGACAGAAGCTAGCTCAGCTGGCTCAATCAAAAGGAATTCCCTTCCAATTTCATGCTGCTGCAATGTCCGGTTGTGAGGTTGAACGTAGTAATCTTAGAATACGTCCTGGAGAAGCGTTGGCCGTAAATTTTCCATACGTCTTGCACCACATGCCAGATGAGAGTGTGAGCACACAGAATCACCGAGATCGGCTTCTAAGGCTAGTCAAAAGCCTGTCACCGAAAGTAGTAACTATTGTTGAGCAGGAATCTAACACCAACACATCCCCCTTCCTTATTCGTTTTCTAGAGACGCTGGATTATTATACTGCTATGTTTGAATCAATAGATGTAGCTCGTTCGAGAGACGACAAGCAGCGAATCAGAGCGGAGCAGCATTGCGTGGCCCGAGACATAGTGAACATGGTAGCTTGTGAGGGGTTTGAAAGGATAGAACGTCATGAACTCCTTGGCAAGTGGAGGATGAGAATGAAGATGGCTGGTTTCACTTCATATCCACTGAGCTCCTCTGTAAGTGGAGCCGTCAAGAATTTGTTGAGGGATTTTAATGGGAACTATAGACTCCAAGAAGTGGATGGGTCTCTCTACCTTGGCTGGAAAAACAGAGCAATGGCAACCTCCTCTGCATGGAGATGA 1908 44.76 MIRHINPDGPPRAPLFVVAFSRCCLQFRLQLHNLYSKRFSFLALFDQGNTENFIIFLKFEDSFIPLLVKREIISATANHIGVLSPKISAEGNSQASSGIHEMHHQSVQKIDPYYLSHLHILENNVSPDASSQGNSVNFSSFKDQFFTLESFPATADLSACNSPSAVSGLSSRSPFSPQGSQSCSSDQPHSFDNTCGSPQSGCSVTDDDNELKYKLKELEISLLGPESDIVDSCYCSFRGGAHQDASVARWNWNQVAEMIPRLNLRDTLIHCAQAIHDSDLNVATLFMDVLGKMVSVSGDPAQRLGAYLLEGLRARLERSGSAIYKALKCEEPTSSELMSYMSVLFQICPYFKFAYTSANAIIWEAMVNEPIIHIIDFQIAQGSQYIPLIHDLANRPGGPPVLLRITGVDDSQSSHARGGGLQIVGQKLAQLAQSKGIPFQFHAAAMSGCEVERSNLRIRPGEALAVNFPYVLHHMPDESVSTQNHRDRLLRLVKSLSPKVVTIVEQESNTNTSPFLIRFLETLDYYTAMFESIDVARSRDDKQRIRAEQHCVARDIVNMVACEGFERIERHELLGKWRMRMKMAGFTSYPLSSSVSGAVKNLLRDFNGNYRLQEVDGSLYLGWKNRAMATSSAWR 635
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5340762 5343803 - Carg00503-RA Car03g00543 144595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00543 635 ProSiteProfiles GRAS family profile. 255 635 IPR005202 -
Car03g00543 635 MobiDBLite consensus disorder prediction 170 200 - -
Car03g00543 635 Pfam GRAS domain family 264 635 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00543 Car-Chr3:5340762 Car20g00575 Car-Chr20:3226120 0 dispersed
Car03g00543 Car-Chr3:5340762 Car07g00301 Car-Chr7:1552894 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3124 PF03514 GRAS 3.80E-125 CL0063 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00543 - - mcha:111005597 981.474