Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car03g00558 | ATGAGAACTTCGAGTCATATGCAATTAGCAGTGAGTGCAAAGGTTAGCGACCGATGGAACTTGTTAGAGTGTGGGAATATGAGCAGTATAAGTTCTGTCCTGGAGAGTACTTGCACACCTGCTAAGGCAGAGGCAAAGGGAAAGCATTTTCCGAGCAGGCAAGAGTCAGAGGCTTTAAGAAAGAACACAGGTTACTGTGTGCAGCCTGCTTGCATTGAACCTTCCTGCATCCAACCATCTTGTGTAGTTCCTACAACCTGCTTCTCACCACGCCTCTTTTCTAGTAAGTCGAAAAAGGAACGGAAACCCAAAACTGAAATTGGAAATCAGGTCAGCCCATTGCCAGAGCTCATTGCAGAACCAACTGATGCCCGATCCATGTCTTTTGTTGGAACTCATGAGTACTTAGCACCTGAGATCATCAAGGGTGAAGGCCATGGAAGTGCTGTAGATTGGTGGACTTTTGGAATTTTTCTATACGAACTACTATTTGGTAAAACTCCTTTTAAGGGGTCTGGAAATCGAGCTACATTATTCAACATTGTCGGTCAGCCACTAAGGTTTCCAGATGCACCAGTTGTTAGTTTTGCTGCAAAGGATCTGATAAGGGGATTGCTAGTGAAGGAACCACAACACAGATTGGCTTATAAACGTGGGGCAACTGAGATCAAGCAGCATCCTTTCTTTGAAGGTGTAAATTGGGCATTAATACGTTGTGCTACTCCTCCTGAAATCCCAAGGCCGGTCGAGATTGAGAGAATACCACATGCAGTAGCATCAACCAGTGAAAAGGCCGTTGCTATTGCAGCAGCAGCAGCTGCAGATAAAAAGGCTTCCGATAATTATCTTGAGTTTGATTTCTTTTAG | 867 | 44.52 | MRTSSHMQLAVSAKVSDRWNLLECGNMSSISSVLESTCTPAKAEAKGKHFPSRQESEALRKNTGYCVQPACIEPSCIQPSCVVPTTCFSPRLFSSKSKKERKPKTEIGNQVSPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNIVGQPLRFPDAPVVSFAAKDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPRPVEIERIPHAVASTSEKAVAIAAAAAADKKASDNYLEFDFF | 288 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 5394291 | 5397910 | - | Carg00518-RA | Car03g00558 | 144610 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car03g00558 | 288 | ProSiteProfiles | Protein kinase domain profile. | 1 | 229 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car03g00558 | 288 | Pfam | Protein kinase domain | 126 | 229 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car03g00558 | Car-Chr3:5394291 | Car18g00579 | Car-Chr18:6510796 | 5.13E-151 | dispersed | |
Car06g00782 | Car-Chr6:6022437 | Car03g00558 | Car-Chr3:5394291 | 1.07E-30 | dispersed | |
Car03g00558 | Car-Chr3:5394291 | Car07g00311 | Car-Chr7:1591049 | 9.60E-150 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
88722 | PF00069 | Pkinase | 3.40E-21 | CL0016 | Car | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car03g00558 | K08286 | - | csv:101209748 | 446.047 |