Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00558 ATGAGAACTTCGAGTCATATGCAATTAGCAGTGAGTGCAAAGGTTAGCGACCGATGGAACTTGTTAGAGTGTGGGAATATGAGCAGTATAAGTTCTGTCCTGGAGAGTACTTGCACACCTGCTAAGGCAGAGGCAAAGGGAAAGCATTTTCCGAGCAGGCAAGAGTCAGAGGCTTTAAGAAAGAACACAGGTTACTGTGTGCAGCCTGCTTGCATTGAACCTTCCTGCATCCAACCATCTTGTGTAGTTCCTACAACCTGCTTCTCACCACGCCTCTTTTCTAGTAAGTCGAAAAAGGAACGGAAACCCAAAACTGAAATTGGAAATCAGGTCAGCCCATTGCCAGAGCTCATTGCAGAACCAACTGATGCCCGATCCATGTCTTTTGTTGGAACTCATGAGTACTTAGCACCTGAGATCATCAAGGGTGAAGGCCATGGAAGTGCTGTAGATTGGTGGACTTTTGGAATTTTTCTATACGAACTACTATTTGGTAAAACTCCTTTTAAGGGGTCTGGAAATCGAGCTACATTATTCAACATTGTCGGTCAGCCACTAAGGTTTCCAGATGCACCAGTTGTTAGTTTTGCTGCAAAGGATCTGATAAGGGGATTGCTAGTGAAGGAACCACAACACAGATTGGCTTATAAACGTGGGGCAACTGAGATCAAGCAGCATCCTTTCTTTGAAGGTGTAAATTGGGCATTAATACGTTGTGCTACTCCTCCTGAAATCCCAAGGCCGGTCGAGATTGAGAGAATACCACATGCAGTAGCATCAACCAGTGAAAAGGCCGTTGCTATTGCAGCAGCAGCAGCTGCAGATAAAAAGGCTTCCGATAATTATCTTGAGTTTGATTTCTTTTAG 867 44.52 MRTSSHMQLAVSAKVSDRWNLLECGNMSSISSVLESTCTPAKAEAKGKHFPSRQESEALRKNTGYCVQPACIEPSCIQPSCVVPTTCFSPRLFSSKSKKERKPKTEIGNQVSPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNIVGQPLRFPDAPVVSFAAKDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPRPVEIERIPHAVASTSEKAVAIAAAAAADKKASDNYLEFDFF 288
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5394291 5397910 - Carg00518-RA Car03g00558 144610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00558 288 ProSiteProfiles Protein kinase domain profile. 1 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00558 288 Pfam Protein kinase domain 126 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00558 Car-Chr3:5394291 Car18g00579 Car-Chr18:6510796 5.13E-151 dispersed
Car06g00782 Car-Chr6:6022437 Car03g00558 Car-Chr3:5394291 1.07E-30 dispersed
Car03g00558 Car-Chr3:5394291 Car07g00311 Car-Chr7:1591049 9.60E-150 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88722 PF00069 Pkinase 3.40E-21 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00558 K08286 - csv:101209748 446.047