Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00575 ATGAGGGTTATTTGCCTTCTAGTATTGATGCTTCTCTTCAATGGGAGTTCTTCAATTGGAGATAGCAAAAATGTATCCATGAGACCTGATGTTGTCGACATTGGGGCTTTATTCTCTTTCAGTTCTATGATCGGCAGAGTTGGAAAAATTGCCGTGGAAGCTGCGGTCGAGGATGTAAATTCCGATCCATCCATCTTGGGGGGGACGAAGCTGAAGCTCAGTTTACATGATACCAATTACAGTGGATTCTTGGGCATCATTGAATCCTTGCGTTTCATGGAGACTAAGACTTTGGCCATAATTGGCCCACAAAACTCTGTGACTGCTCATGTTTTATCTCATATTGCAAACGAGCTCCAAGTCCCTTTATTGTCGTTTTCGGCTACAGATCCCACACTGTCATCACTTCAGTTTCCTTTCTTTATTAGAACTTCACAGAATGATCTGTATCAGATGGCTGCCGTAGCTGAAATAGTTGATTACTTTCAATGGAGACAAGTGATTGCCATCTTTGTTGATGACGACCATGGTAGAAATGGTATTGCAGCATTGGGGGATCAACTTAATGAGAAACGATGCAAGATCTCGTTAAAAGTACCATTGAAGCCTGATGCAAGTCGAGACGAGGTCACTGATGCACTTGTTAAGGTGGCTTTATCAGAGTCTCGGATACTCGTTGTTCACACTTATGAGACCACAGGTATGGTGGTGCTCGATGTGGCTCGATCTCTTGGAATGACAGAACCTGGGTATGTATGGATAGCTACTAACTGGCTTTCTTTACTACTCGACACGAATTCTCCTCTACCTTCTTCTTCTATGGAAAATATTCAAGGACTTGTTGCTTTGCGTCTTTATTCACCAGATTCTGCACTGAAGAGGAGTTTTGTTTCAAGGTGGACTAACTTGACTAATGGAAAGGCATCAAGTGGTCCGCTCGGGTTGAGTACGTATGGGTTATATGCTTACGATACGGTTTGGATGCTGGCTCATGCAATAAACGCATTTCTTAATGAAGGTGGAGATCTTTCATTCTCAAAACCTTCCAAGTTTACTGGAACTGATGTTGGAACTTTGAACTTGAACTCTATGAGCATCTTCAATGGTGGGAAGACACTACTTCATAGAATTTTAGACGTCAAGTTTACTGGAATAACAGGTCGGGTTGAGTTCACTCCAGATAGGGACATAATCCGCCCTGCATTCGAAGTGATCAATATAATCGGCACGGGAGAGAGGAGAATTGGTTATTGGTCTAACTATTCTGGTTTGTCAACTGTGCCTCCTGAAAGCCTTTACTCGAAACCACCTAACCGAACCAGTTCTAATCAAAAGCTATATGATGTGGTATGGCCTGGACAAGCAACACAGAAGCCTCGTGGATGGGCATTTCCAAACAGTGGAAGACGATTGAGAATCGGAGTCCCGAGACGAGTAGGTTATCAAGAATTTGTCTCACAAGTAGAAGGAACCGACATGTTCCGAGGCTACTGCGTCGATGTCTTTACTGCAGCAATCAACTTGTTGCCTTATGCAGTCCCCTATAAGTTAATTCCATTTGGAGATGGCGTTACTAATCCGAGCGGAACCGAACTTGTTCGTCTACTCTCAACTGGGGTCTTTGATGCAGCTATGGGTGACATCGCAATTATCACGAACCGAACCAGGATGGCCGACTTTACGCAGCCATACATCGAGTCTGGCTTAGTAGTCGTAGCCCCGGTCAAGAAGTTGAACTCTAATGCTTGGGCTTTTTTACGGCCGTTCACCCCGAAGATGTGGTGCATTACTGCTGTGTCTTTTCTTGTAATAGGAGCAGTTGTTTGGACTTTAGAGCATCGGATAAATGACGATTTTCGGGGGCCTCCGAAGCGACAAATTATTACTATTCTATGGTTCAGCTTTTCAACTCTGTTCTTCTCTCATCGGGAAAACACCGTCAGTACCCTCGGTCGAATCGTGCTGCTCGTATGGTTATTTGTTGTTCTAATTATCAACTCGAGCTACACTGCAAGCTTGACCTCTATCCTTACAGTTCAACAACTTTCTTCTCCTGTCAAAGGGATTGAAACTTTGATTTCAAACAATGACCCAATTGGCTATCAGCAGGGTTCATTTGCTCGAAACTACTTGATCGAGGAACTTGGCATTCATGAGTCGAGACTCGTTCCACTCGTCTCAACAGAACACTATGTCAAAGCATTGAATGACGGGCCAACGAATAACGGTGTTGCTGCTATTATCGACGAGCGAGCATATGTAGAGCTCTTCCTTTCGACCCGTTGCGAATACAGCATTGTTGGCCAAGAGTTCACCAAAAATGGGTGGGGATTTGTAAGTACTTCAATCAACAACAACGTTGTCTGTCTGTCTGTTTGTTTGCTTGTTTGCTTGCTTGCCTGTCTGTCTATCAAGTTGTCATCTGATGATCATACACTGTCCAAACAGGCTTTCCAGCGCGACTCTCCTTTAGCAGTTGACATGTCCACAGCTATTCTTAGACTCTCCGAAAATGGTGATCTTCAAAGGATCCATGACAAATGGTTAATGAAAAGTGCTTGTACATCACAAGCCTCGAAATTCGAGGTGGATCGACTTCAGCTCGGTAGCTTTTGGGGACTTTTTCTAATATCTGGATTAGCCTGCTTGCTCGCTCTATTGATATACCTCTTTCTAACGGTGCGCCAATATAGCAAGCACTACCCTGAAGAACTCGGGTCTTCCGAGCGATCTTCTCGATCGTCAAGCTTGCATAGATTTCTTTCTTTTGCAGATGAAAAGGAAGAAGTCGTCAAAAGTCGATCCAAGCGTCGACGGATGCAGGAGGCTTCGGTTCGAAGCATGAATGAAGAAAATTCGACAGGCAGTTCAAGAAAACATGGCCATGACGATGGTTATGATATTAATGCATGA 2913 43.98 MRVICLLVLMLLFNGSSSIGDSKNVSMRPDVVDIGALFSFSSMIGRVGKIAVEAAVEDVNSDPSILGGTKLKLSLHDTNYSGFLGIIESLRFMETKTLAIIGPQNSVTAHVLSHIANELQVPLLSFSATDPTLSSLQFPFFIRTSQNDLYQMAAVAEIVDYFQWRQVIAIFVDDDHGRNGIAALGDQLNEKRCKISLKVPLKPDASRDEVTDALVKVALSESRILVVHTYETTGMVVLDVARSLGMTEPGYVWIATNWLSLLLDTNSPLPSSSMENIQGLVALRLYSPDSALKRSFVSRWTNLTNGKASSGPLGLSTYGLYAYDTVWMLAHAINAFLNEGGDLSFSKPSKFTGTDVGTLNLNSMSIFNGGKTLLHRILDVKFTGITGRVEFTPDRDIIRPAFEVINIIGTGERRIGYWSNYSGLSTVPPESLYSKPPNRTSSNQKLYDVVWPGQATQKPRGWAFPNSGRRLRIGVPRRVGYQEFVSQVEGTDMFRGYCVDVFTAAINLLPYAVPYKLIPFGDGVTNPSGTELVRLLSTGVFDAAMGDIAIITNRTRMADFTQPYIESGLVVVAPVKKLNSNAWAFLRPFTPKMWCITAVSFLVIGAVVWTLEHRINDDFRGPPKRQIITILWFSFSTLFFSHRENTVSTLGRIVLLVWLFVVLIINSSYTASLTSILTVQQLSSPVKGIETLISNNDPIGYQQGSFARNYLIEELGIHESRLVPLVSTEHYVKALNDGPTNNGVAAIIDERAYVELFLSTRCEYSIVGQEFTKNGWGFVSTSINNNVVCLSVCLLVCLLACLSIKLSSDDHTLSKQAFQRDSPLAVDMSTAILRLSENGDLQRIHDKWLMKSACTSQASKFEVDRLQLGSFWGLFLISGLACLLALLIYLFLTVRQYSKHYPEELGSSERSSRSSSLHRFLSFADEKEEVVKSRSKRRRMQEASVRSMNEENSTGSSRKHGHDDGYDINA 970
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5494318 5498188 - Carg00535-RA Car03g00575 144627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00575 970 Pfam Bacterial extracellular solute-binding proteins, family 3 528 759 IPR001638 -
Car03g00575 970 Pfam Receptor family ligand binding region 50 408 IPR001828 -
Car03g00575 970 MobiDBLite consensus disorder prediction 926 945 - -
Car03g00575 970 Pfam Ligand-gated ion channel 760 881 IPR001320 GO:0015276|GO:0016020
Car03g00575 970 MobiDBLite consensus disorder prediction 953 970 - -
Car03g00575 970 MobiDBLite consensus disorder prediction 926 970 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g00575 Car07g00334 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00575 Car-Chr3:5494318 Car20g00529 Car-Chr20:2910769 0 dispersed
Car01g01595 Car-Chr1:13172205 Car03g00575 Car-Chr3:5494318 0 wgd
Car03g00575 Car-Chr3:5494318 Car07g00334 Car-Chr7:1677154 0 wgd
Car03g00575 Car-Chr3:5494318 Car09g00032 Car-Chr9:157713 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00575 K05387 - csv:101213408 1596.25