Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00582 ATGGCGTTTTCCGATGAGAATAATCCCAACTTGATCAAACCCACTGGGTTTCTTCCAGGAGGAGGGTTGGAGGAGAGAGGGAGAGCTAATAATCGGAGGGCTCTTATTGATATTAATAAAAATTCTGTGGTGAATCAAGCCTACCCTTGTGTTGTTAACAAGAGAGGCCTCTCGGGAAAGCAAGAAATCTGCGAGAAAAAGCAGGTTGATCCATTTCATAGACCGATTACGAGAAAGTTTGCTGCTCAAATCGCGAGTAGCCAACAGCTTCATCATCTTCCCCAAGAAAATAATGCATTTGGGCATTCCATATTTGTAGACGAAGATTGCAAAACCTTAGAAAACGACCATCCAGTTCCAATGTTCTTGGAGAAACCAGAGCCATCATTGTCTCAAGAACCAAGCCAAATGGAGGAGGTTGAAATGGAGGATATTGCAGAAGACGACGTCGACCACGACGACCCGGTAATTGACATTGATAGTGTCGATTCCGAGAACCCGCTTGCGGTTGTCGAGTATGTCGACGATCTCTATGAACACTACAGAAAAATTGAGAATTCAAGCTGTGTTCCTCCAAATTACATGAACAAACAAATTGATATTAATGAGAAGATGAGAGCTATATTGATTGATTGGCTTATAGAGGTGCACGACAAGTTTGATCTGATGGGAGAAACATTGTTCCTTACTGTGAATCTCATAGACAGGTTTTTGTCACAAAAAACAGTAGTGAGAAAGAAGCTTCAGCTGGTTGGTTTGGTTTCTATGCTGTTGGCTTGCAAGTACGAGGAAGTTTCTGTCCCTGTTGTGGGTGATTTGATTCTTATTTCTGATAAAGCTTACTCTAGAACAGAAGTTCTTGAACTGGAGACAGTGATGCTCAACTGTTTGCAGTTTAACATGTCTGTTCCCACACCCTTTGTCTTCCTCCAAAGGTTCCTTAAGGCTGCTCAAGCTGACAAAAAGCTCGAGCTGATGGCGTTCTTCTTGATCGAACTCTCGCTGGTCGAGTATGAAATGCTGAGGTTCCCACCGTCGTTGCTAGCAGCGGCCGCGACATATACAGCTCAATGTACTATTGCCGGAGTGGAGTGTTGTTGGAGCCGGACATGCGAGTGGCATTCCAGCTACTCAGAAGAGCAGCTCCTAGAATGCTCGAGACTAATGGTGGGGTTTCATCAAAAGGCGGCGACCGGGAAGCTCACCGGAGTTCATAGGAAGTACTGTACATCAAAATTTAACTACACGGCAAAACGTGAACCTGCACACTTTCTTTTGCAGACTCAGCAATAA 1293 44.32 MAFSDENNPNLIKPTGFLPGGGLEERGRANNRRALIDINKNSVVNQAYPCVVNKRGLSGKQEICEKKQVDPFHRPITRKFAAQIASSQQLHHLPQENNAFGHSIFVDEDCKTLENDHPVPMFLEKPEPSLSQEPSQMEEVEMEDIAEDDVDHDDPVIDIDSVDSENPLAVVEYVDDLYEHYRKIENSSCVPPNYMNKQIDINEKMRAILIDWLIEVHDKFDLMGETLFLTVNLIDRFLSQKTVVRKKLQLVGLVSMLLACKYEEVSVPVVGDLILISDKAYSRTEVLELETVMLNCLQFNMSVPTPFVFLQRFLKAAQADKKLELMAFFLIELSLVEYEMLRFPPSLLAAAATYTAQCTIAGVECCWSRTCEWHSSYSEEQLLECSRLMVGFHQKAATGKLTGVHRKYCTSKFNYTAKREPAHFLLQTQQ 430
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5526061 5528901 + Carg00542-RA Car03g00582 144634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00582 430 ProSitePatterns Cyclins signature. 206 237 IPR006671 -
Car03g00582 430 MobiDBLite consensus disorder prediction 1 25 - -
Car03g00582 430 Pfam Cyclin, N-terminal domain 176 302 IPR006671 -
Car03g00582 430 Pfam Cyclin, C-terminal domain 304 417 IPR004367 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00582 Car-Chr3:5526061 Car19g00883 Car-Chr19:9117124 5.35E-77 dispersed
Car01g01581 Car-Chr1:13104446 Car03g00582 Car-Chr3:5526061 1.71E-167 wgd
Car03g00582 Car-Chr3:5526061 Car07g00340 Car-Chr7:1703286 0 wgd
Car03g00582 Car-Chr3:5526061 Car09g00048 Car-Chr9:245604 9.45E-40 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00582 K21777 - csv:101216622 747.658