Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00596 ATGAGTTCTTGTATGCTTCAAGATCGTGGCTTGCGCCCGGGGCTTGCTGCTGCAGACCAATCAATTCCCTACTGGAACAACAAGGCCGACAATGCATGGCAGCTCACGGCAGCCACCATGGTCGGCCTCCAAACTGTTCCGGGGCTGGTCATCCTCTATGGCAGCATGGTGAAGAAAAAATGGGCTGTCAACTCCGCCTTCATGGCGCTCTATGGCTTCGCTTCTGTGCTCGTCTGTTGGGTGTTGTGGGCACATCGTATGGCATTCGGTGACCGATTGTTCTGGCTCATTGGTGTGCCTGGTGCAGCGCTGTCTGAAGGGTACCTTCTTTCACATTCTACACAAGGCTGTTTCCCAATGGCTGACTACGTGTTTTTCCAGTTCGCTTTCGCCGCCATTACTGTCGTGTTGCTTGCCGGGTCCTTGCTGGGAAGGATGAATTTTGGTGCATGGATGCTTTTTGTTCCAATGTGGCTAACTGTTTGTTACACTGTTGGGGCATTCTGTATATGGGGGAATGGGTTTATTCAGAAGTACCTCATTGATTACGCCGGCGGCTATGTCATTCATCTTTCTTCTGGGGTGGCTGGTTTCACTGCCGCTTACTGGGTCGGGCCACGACACTCCCGCGACAGGCAAAGCTTCCCACCAAACAACATACTCCACATGGTATTTGGGGCAGGGTTTCTTTGGCTGGGCTGGACTGGATTCAATGGAGGAGCTCCATTTGCAGCGGGTCGGATTACGTCGCTAGCCATTTTGAACACGCATATTTGCACAGCAACAAGTCTGTTGATCTGGGTTTCAATGGACATCATAGTATACAAGAAAAGCTCTGTGATTGGTGCAGTTCAAGGGATCATCACTGGCCTTGTCTGTATCACTCCTGGTGCAGGGCTTGTGGACTCGGTCGCAGCTGTGGTGATGGGTGTGCTTGCTGGTTTGGTTCCATGGTACACCATGATGGTGCTGCACAGGAAGCTGGCATTCCTTCAGTGTGTCGACGATACTCTGGGTGTCTTCCACACACATGCTGTGGCTGGCTCCATGGGAGGACTCCTCACAGGTTTCTTTGCTAAACCCAGCCTTTTGAAAATGATGTATCCAGATTCTCTATATGGTCCAGGCTTCCTGTATGCCATCTCCAATAGAAAGCTCAAAGATGGCCTCAAACAAATTGGCATCCAGTTCGCTGGAGCAGTGTTTATCACCCTCTGGAATGCCATCTTTACCAGCATTATCTGTTACCTGATTAGCCATATTGTTAACTTAAGAATGAAAGAAGAGGACCTGGAAATAGGCGACGACGCTGCTCATGGAGAAGAACCCTATGCATTGTGGGGCGACGGAGAGAAGATGCCCTCTTCATTTCGTCTTCCACACACCCCTAGGTTCCCATCATTATGCAGGTGGGATTAG 1419 50.53 MSSCMLQDRGLRPGLAAADQSIPYWNNKADNAWQLTAATMVGLQTVPGLVILYGSMVKKKWAVNSAFMALYGFASVLVCWVLWAHRMAFGDRLFWLIGVPGAALSEGYLLSHSTQGCFPMADYVFFQFAFAAITVVLLAGSLLGRMNFGAWMLFVPMWLTVCYTVGAFCIWGNGFIQKYLIDYAGGYVIHLSSGVAGFTAAYWVGPRHSRDRQSFPPNNILHMVFGAGFLWLGWTGFNGGAPFAAGRITSLAILNTHICTATSLLIWVSMDIIVYKKSSVIGAVQGIITGLVCITPGAGLVDSVAAVVMGVLAGLVPWYTMMVLHRKLAFLQCVDDTLGVFHTHAVAGSMGGLLTGFFAKPSLLKMMYPDSLYGPGFLYAISNRKLKDGLKQIGIQFAGAVFITLWNAIFTSIICYLISHIVNLRMKEEDLEIGDDAAHGEEPYALWGDGEKMPSSFRLPHTPRFPSLCRWD 472
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5586671 5588319 + Carg00556-RA Car03g00596 144648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00596 472 Pfam Ammonium Transporter Family 32 444 IPR024041 GO:0008519|GO:0016020|GO:0072488
Car03g00596 472 ProSitePatterns Ammonium transporters signature. 182 207 IPR018047 GO:0008519|GO:0016020|GO:0072488
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g00596 Car07g00351 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00596 Car-Chr3:5586671 Car05g00341 Car-Chr5:1964897 0 dispersed
Car03g00596 Car-Chr3:5586671 Car06g00188 Car-Chr6:1131490 9.02E-178 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00596 K03320 - csv:101218977 907.131