Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00605 ATGCAATTACAGGAGCCGGTTATCAGATTGAGGAGTTTTGCTGCTTTGAATTGGATGTTATCCAGCTTGATGAACTTTCTGAGGGCTTGCTGGCTGCCGTCCTCGGACAATATCGTACACAGCGGTTCGGATTCAGCAGGTCGTCGTGAAGGCTTACTATGGTACAAGGATATTGGACAGCACATGAATGGTGAATATTCAATGGCTGTTGTCCAGGCTAATAACTTGCTTGAGGATCAAAGCCAGATCGAATCGGGTTCATTGAGCTTGGTCGAGTCCGGGCCATATGGAACCTTTATTGGTGTTTATGATGGTCATGGTGGACCGGAAGCATCAAATTACATATATGATAATCTTTTCCAGCATCTAAAAAGGTTCACCTCAGAACAACAATCAATGTCTTCTGATGTGATAAAGAAAGCATTTCAAGCTACAGAGGAAGGGTTCATTTCTTTAGTGACTAAACAATGGCAAATGAAGCCCCAAATTGCAGCTGTTGGTTCATGCTGCCTGGTTGGTGTGATCTGTGGTGGCACCCTTTACATAGCCAACCTTGGCGATTCCCGTGCCGTGCTTGGAAGGGTCATGCGTGCAACGGAGGAGGTTATCGCCGTGCAGCTATCAGCTGAGCATAATGTGAGCATAGAATCTGTCAGAAGGGAGATGCATTCTCTGCACCCAGATGACTCGCATATAGTAGTTTTGAAGCATAATGTATGGCGAGTAAAGGGCTTAATACAGGTTTCCAGATCTATCGGTGATGCATATTTAAAGAGGGCAGAATTCAACAGGGAACCCTTGTATGCTAAGTTTAGGCTTCGTGAACCATTTACTCGACCGATATTGAGCTGTGAACCATCAATTTCGGTGCATGAACTTCAACCACATGATCAATTCATCATATTTGCCTCTGATGGCATGTGGGAGCACATTAGCAATCAGCAAGCTGTAGATATTATTCGAAATCACCCCCATAATGGAAGTGCTAAGAGGTTGGTAAAAGCTGCTATGCTGGAAGCAGCTAAGAAACGAGAAATGCGATATTCAGATTTGATGGAAATTGATCGTGGTGTACGCCGCCATTTTCACGACGACATCACCGTCATAGTTGTATTTCTTGACTCTAATCTTGTAAGCAGAGCGAGCTTGGTCCGAGGTCCAACCATGTCTTTGAGAGGGCGCGGTGTTATCATACCTACAAAATCTCTAGCTCCTTGTGCCACACCTACAGAGCTTCACACAATCTGA 1248 44.79 MQLQEPVIRLRSFAALNWMLSSLMNFLRACWLPSSDNIVHSGSDSAGRREGLLWYKDIGQHMNGEYSMAVVQANNLLEDQSQIESGSLSLVESGPYGTFIGVYDGHGGPEASNYIYDNLFQHLKRFTSEQQSMSSDVIKKAFQATEEGFISLVTKQWQMKPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVMRATEEVIAVQLSAEHNVSIESVRREMHSLHPDDSHIVVLKHNVWRVKGLIQVSRSIGDAYLKRAEFNREPLYAKFRLREPFTRPILSCEPSISVHELQPHDQFIIFASDGMWEHISNQQAVDIIRNHPHNGSAKRLVKAAMLEAAKKREMRYSDLMEIDRGVRRHFHDDITVIVVFLDSNLVSRASLVRGPTMSLRGRGVIIPTKSLAPCATPTELHTI 415
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5617688 5620394 - Carg00565-RA Car03g00605 144657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00605 415 ProSitePatterns PPM-type phosphatase domain signature. 99 107 IPR000222 GO:0043169
Car03g00605 415 Pfam Protein phosphatase 2C 98 344 IPR001932 -
Car03g00605 415 ProSiteProfiles PPM-type phosphatase domain profile. 65 373 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00605 Car-Chr3:5617688 Car07g00667 Car-Chr7:3388579 0 dispersed
Car20g00353 Car-Chr20:1990725 Car03g00605 Car-Chr3:5617688 5.49E-31 dispersed
Car16g01184 Car-Chr16:10034965 Car03g00605 Car-Chr3:5617688 1.67E-118 wgd
Car20g00642 Car-Chr20:3616045 Car03g00605 Car-Chr3:5617688 0 wgd
Car03g00605 Car-Chr3:5617688 Car06g00111 Car-Chr6:720813 7.46E-180 wgd
Car03g00605 Car-Chr3:5617688 Car07g00353 Car-Chr7:1775218 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00605 K01102 - csv:101219696 738.413