Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00608 ATGGCCTCATTTGCTGTGGTATTCTCGCACTTTGCAATTCTTTTGCTGTCTGTTTTGCCTTTGGGGAGTTCACTGAGCTTAGACTACTACGAGAAGACATGTCCAGGTGTTGACTTCATCGTTAATAAAGCTGTCAAGAGTGCAGCTTACAAAGACAAGACTGTCCCTGCGGGACTCCTCCGGATGCACTTTCATGACTGTTTTATAAGGGGCTGTGATGCATCTGTACTGCTGAATTCAGTAGGGAACAACAAAGCTGAGAAAGATGGGCCTCCTAATTTGTCTTTGCACTCGTTTTTCGTGATCAACAACGCAAAGAAAGAACTGGAATCCTATTGCCCCGGTGTTGTCTCTTGTGCTGATATTGTGGCTCTAGCTGCAAGGGATGCAGTTGTGCTTTCTGGAGGCCCAACATGGGATGTTCCCAAAGGGAGAAAGGATGGAAGGATATCAAAGGCTAGTGAAACAATACAATTGCCATCTCCAAGGTTCAACATTTCTCAGCTGCAACAAAGCTTCTCCCAAAGGGGATTGTCCTTGGACGACCTAGTGGCTCTTTCAGGAGCACACACCTTGGGATTTGCTCATTGCTCATCCTTTGAAGGTAGAATTCGCAACTTCTGTCCAGCCAGCAACGTCGACCCTGAAATGAATCCGTCCTTTGCAGCAAGTCTAAGAAACACATGCCCAGTAAACAACAAGGCTAAAAATGCTGGTGCTTACATGGATACTTCTTCAACCACATTTGACAACAATTACTATAGACTGATACTTCAAAAGAAGGCCCTGTTTTCTTCTGACCAAGCTCTGCTAAACTTTCCTAAGACCAAGAATCTTGTTTATAAGTTTGCAAGTTCAAAGGAAGCTTTTAACCGTGCATTTGTTAATTCTATGATCAAGATGAGTAGCATCACTGGAGGTCAAGAGATCAGGAAGAATTGCAGGGCAGTGAACTAA 957 44.1 MASFAVVFSHFAILLLSVLPLGSSLSLDYYEKTCPGVDFIVNKAVKSAAYKDKTVPAGLLRMHFHDCFIRGCDASVLLNSVGNNKAEKDGPPNLSLHSFFVINNAKKELESYCPGVVSCADIVALAARDAVVLSGGPTWDVPKGRKDGRISKASETIQLPSPRFNISQLQQSFSQRGLSLDDLVALSGAHTLGFAHCSSFEGRIRNFCPASNVDPEMNPSFAASLRNTCPVNNKAKNAGAYMDTSSTTFDNNYYRLILQKKALFSSDQALLNFPKTKNLVYKFASSKEAFNRAFVNSMIKMSSITGGQEIRKNCRAVN 318
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5637620 5638899 + Carg00568-RA Car03g00608 144660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00608 318 Pfam Peroxidase 42 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car03g00608 318 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Car03g00608 318 ProSiteProfiles Plant heme peroxidase family profile. 24 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00608 Car-Chr3:5637620 Car18g01118 Car-Chr18:11187680 4.55E-119 dispersed
Car12g00372 Car-Chr12:2373390 Car03g00608 Car-Chr3:5637620 9.30E-153 wgd
Car03g00608 Car-Chr3:5637620 Car07g00357 Car-Chr7:1801617 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00608 K00430 - csv:101217954 585.104