Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00631 ATGGAGCACTGGAAAACGGGGGATTTCTCCTCTCAATCTATTGTAGCAGCAGCTGATTTAGTTCCTTCCTCGTCTCTTCAGCCTCAGCCGCTCTCTTTTTCCTCGAGTCGCCACCATAACAACCAGCTTCCTGAATCCAGGTTAAGAACAGATGCAGAAGTAAAAGATCCAATGGCAGTGAAAAAAACCCAAAAGGCAGATCGTGAAAAATTGAGAAGAGACAGACTGAATGAACATTTTCATGAACTTGGAAACACATTGGATCCAGTTAGGCCCAAAAATGACAAGGCCACCATCCTAACAGACACCATCCAAACGCTGAAGGAGTTAACTGCCGAAGTCAATAGATTAAAGGCCGACTACGAAGCTCTTTCTGAAGAATCACGTGAGCTAACCCAGGAAAAGAATGAACTTAGAGATGAGAAAGCTTCACTAAAATCAGATATTGAAAATATAAATGCTCAGTATCAGCAAAGACTGAGGGTCATGTTTCCCTGGGCCACAATGGATCCTTCTGAGGTCATGGTGCCCCCATATTCCTACCCAGTTCCTGTTTCCGTTCCCCCAGGACCGATTCCCATGCATCCGTCATTGCAGCCCTTCACCTTCTTTGGAAATCAGAATCCCGGTGCTATTCCCAACCCCTGTTCCACATTTGTCCCATATACTGCTGCTGTCCATCCTCCAAATGGTCAGCCCTCTGCCCAATATGCTTCCAATTCACATATATCTAGCAAACAAGATTCCAGAAGTAGGTCATCAGATCAGCACAGGCGCAGTAATGCAGGAAGCTGCGACGAATCAAACGATGTAGCAACGGACCTTGAACTTAAGATGCCTGGATCCTCAACACAACAGGATGCATCCTCTAGAAGTAAGAAAGGTAAGCAGTCTCAGAGGAAAGAAAAAAGTATTACAGATTGTAGTTCGTCGAGTCGGGTTTCTTCATCCAAAGTTCTTCAAGATAGCTCCTCTAACAGCATTGGCGATATCCCGAAACAGAACAACTAA 1011 45.0 MEHWKTGDFSSQSIVAAADLVPSSSLQPQPLSFSSSRHHNNQLPESRLRTDAEVKDPMAVKKTQKADREKLRRDRLNEHFHELGNTLDPVRPKNDKATILTDTIQTLKELTAEVNRLKADYEALSEESRELTQEKNELRDEKASLKSDIENINAQYQQRLRVMFPWATMDPSEVMVPPYSYPVPVSVPPGPIPMHPSLQPFTFFGNQNPGAIPNPCSTFVPYTAAVHPPNGQPSAQYASNSHISSKQDSRSRSSDQHRRSNAGSCDESNDVATDLELKMPGSSTQQDASSRSKKGKQSQRKEKSITDCSSSSRVSSSKVLQDSSSNSIGDIPKQNN 336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5736414 5739455 + Carg00591-RA Car03g00631 144683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00631 336 MobiDBLite consensus disorder prediction 278 292 - -
Car03g00631 336 Pfam Helix-loop-helix DNA-binding domain 61 110 IPR011598 GO:0046983
Car03g00631 336 MobiDBLite consensus disorder prediction 24 41 - -
Car03g00631 336 MobiDBLite consensus disorder prediction 227 336 - -
Car03g00631 336 MobiDBLite consensus disorder prediction 293 307 - -
Car03g00631 336 MobiDBLite consensus disorder prediction 248 264 - -
Car03g00631 336 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 60 110 IPR011598 GO:0046983
Car03g00631 336 MobiDBLite consensus disorder prediction 308 336 - -
Car03g00631 336 MobiDBLite consensus disorder prediction 24 53 - -
Car03g00631 336 MobiDBLite consensus disorder prediction 229 247 - -
Car03g00631 336 Coils Coil 100 155 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g00631 Car07g00374 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00631 Car-Chr3:5736414 Car16g00858 Car-Chr16:6308245 6.78E-21 dispersed
Car03g00631 Car-Chr3:5736414 Car07g00374 Car-Chr7:1868212 2.39E-166 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3129 PF00010 HLH 1.20E-08 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00631 - - cmos:111453878 581.637