Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00644 ATGGAGTCTCCTCTGTTATTCTTGATGCTGCTGCTCCTCTGGGGTGCTCTGTTTTCCTCCTCTGCCGACACTAGCCCCCGGAGTTTACCGGAGATTCAGGCATTGATGTCCTTTAAACTTAATTTACATGACCCTCTCGGTGCATTGACTGCTTGGGATTCTTCCACCCCATTGGCGCCCTGTGACTGGCGGGGTATTGTTTGTACCAATAATCGAGTCACTGAACTCCGTTTGCCTCGTCTTCAACTCTCTGGTAGATTGACCGATCAGTTACCCAACTTGCCCATGTTGCGGAAGCTGAGTATCCGTTCCAATTTCTTCAATGGTACGATTCCGTCTTCTTTGTCCAAATGTCTGTTTCTGCGTTCCGTTTTCTTGCAGTACAATTCGTTTTCCGGTGGCATTCCGGCGGAGTTTGGGAATATGAGTAATCTCCGTATTCTCAACGTGGCGGAGAATCACCTCTCCGGTGTCATCCCCGGCGACCTTCCGAGTAGCCTTAGGTATCTCGATCTTTCGTCGAACGCATTTTCCGGTCAGATTCCAAGGAGCATTGTGAACATGACGCAGCTTCAGGTTGTTAATCTCTCTTTCAACATGTTCGGCGGGGAGATTCCGGCGAGCTTTGGTGAACTTCAAGAGCTTAAACATCTCTGGCTGGACCACAATATTTTAGAAGGGACGTTGCCTTCGGCTCTTGCGAATTGTTTTTCGCTCGTTCATTTGAGCGTTGAAGGAAATGCACTCCAAGGCGTAATCCCCGCCGCCATTGGAGCTCTTCCGAATCTTCAAGTTATTTCACTCTCGCATAATAGTCTCTCTGGCTCAGTTCCTTACTCCATGTTTTGCAATGTCTCGACGCATCCGCCGTCGCTTCGGATCGTTCAACTTGGATTTAATGGGTTCACGGACATTGTCAAATCTCAGACAGCAACGTGTTTTAGTGCTCTACAGGTCCTCGATATCCAACACAATCAGATAACGGGAGAGTTCCCTTCGTGGTTAACGGGCGTTTCCACTCTGACACTCTTGGATTTTTCCGTCAATCACTTCTCCGGCCAGATTCCGCCTGGGATTGGGAATCTTTCGGGACTGCAAGAGCTCAGATTAGCGAATAACTCGTTTCACGGCGCCATTCCGTCTGAAATCAAGAATTTCGCCTCCATTTCTGTCATTGATTTTGAAAGGAATCGCTTAACCGGAGAGATTCCGCCGTTTTTGGGCTATATGAGAGATCTGAAACAGTTGTCTCTCGGAGGAAATTGTTTTTCCGGCACTGTTCCGGCCAGTTTGGGAAATCTCTTGGCGCTTGAAATCTTGAATTTAGAGGACAACGGCTTGAACGGAACCATTCCGCTGGAGCTAATGGGGCTTGGGAATTTAACAGCAATGGAACTCGGTGGGAACGAGTTTTCCGGTGAGGTTCCGACCGGCATTGGGAATCTCAGTCGTCTTGAGATTTTGAATCTCAGTGCCAACAGTCTTTCCGGGATGATTCCGTCCAGTCTTGGCAATCTCTTCAAATTAACGACTCTGGACTTGAGCAAACAGAATATTTCCGGGGAGCTGCCATTTGAGCTATCTGGTTTGCCTAATTTGCAGGTAATTGCATTACAAGAAAACAAGCTATCTGGGAATGTTCCTGAAGGATTCAGTAGTTTAATGGGTTTGCGCTACTTGAATCTAAGCTCAAACAGATTTTCCGGTCAAATCCCTTCAAATTATGGGTTTCTTCGATCACTTGTTTCTCTGTCATTATCAGACAATCACATTTCCGGCTCGATCCCTTCCGAGCTGGGTAACTGCTCTGATCTACAAATTTTGGAGGTCCATTCAAATGCTCTTTCAGGCCATATTCCGGCCGATCTGTCTCATTTATCTCATCTGCTAGAGCTGGACTTGGGCAGGAATAAATTGACGGGTGAAATCCCAGAGGCGATCTCAAGTTGCTCGTCTTTAGAATCTCTCCATCTGAACTCGAATCATCTTTCGGGTAGCATACCGGAGTCGTTGTCGAAGCTCTCGAACTTAACCTCGCTCGACCTCTCATCCAACAATTTAAGTGGTGTAATCCCTGCTAATCTTAGCTCCATTACCGGATTGGCGAGCTTAAACGTATCGAGTAATGGTCTAGAAGGCGAAATTCCACCCTCTTTAGGCTCTAGATTCAACAGTTCATCTGTGTTTGCTAACAATTCTGATTTATGTGGGAAACCATTGGCTCGGAATTGTAAGGATACAGAGAAAAAGGATAGAATGAAGAGATTGATACTCTTCATTGCAGTGGCCGCCAGTGGAGCTTGCCTCTTGACTTTGTGTTGCTGCTTTTACATTTTCAGCTTGTTGAGATGGCGGAAGAGGCTCAAAGAGAAGGCGTCTGGAGAGAAGAAAACAAGCCCAGCAAGGGTTAGCTCTGCGGCAAGTGGTGGGCGTGGAAGCTCAGAAAATGGAGGGCCAAAGCTTGTAATGTTCAACAACAAGATTACCTTGGCGGAAACAATCGAAGCAACAAGGCAATTCGATGAAGAAAATGTTCTAAGCAGAACCCGTTATGGGTTGGTTTTCAAGGCTTGCTACAATGATGGCATGGTGCTCTCAATCCGCCGCCTCTCAAATGGATCATTGGACGAAAACATGTTCAGAAAAGAAGCTGAATCATTGGGAAAAGTCAGGCACCGCAATCTCACTGTTCTTCGTGGCTACTATGCTGGCCCACCTGATATGCGGCTGTTAGTATATGACTACATGCCTAATGGAAACCTTGCCACTCTCCTTCAGGAAGCATCTCACCAAGATGGTCATGTTCTTAATTGGCCAATGCGGCATCTCATTGCTCTTGGAATCGCCCGTGGCTTAGCCTTTCTCCATTCATCATCCATTATCCATGGAGATGTTAAACCACAAAGTGTTCTATTCGACGCCGATTTCGAAGCTCATTTGTCCGATTTCGGGCTCGATCGATTAACTCTCACGGCCTCTACCGAAGCATCCACATCTACCTTAGTAGGCACGTTGGGCTACATTGCCCCGGAGGCAGTGTTGACAGGGGAGGCCACCAAGGAATCTGATGTCTACAGCTTTGGCATTGTGTTACTCGAGATTTTAACAGGGAAGAAACCAGTGATGTTCACAGAAGATGAAGACATCGTGAAGTGGGTAAAAAAGCAATTGCAGAGAGGCCAAATTACTGAGCTTTTAGAACCAGGATTGCTTGAGCTGGATCCGGAGTCATCAGAATGGGAGGAGTTCTTACTAGGTGTAAAAGTTGGATTGCTTTGCACTGCACCCGATCCCCGTGATCGGCCAACCATGTCGGATATCGTTTTCATGCTAGAAGGTTGTCGAGTCGGACCCGATATCCCGTCCTCGGCCGATCCCACCTCCCAACTCTCGCCACCGAACCCATAA 3408 47.24 MESPLLFLMLLLLWGALFSSSADTSPRSLPEIQALMSFKLNLHDPLGALTAWDSSTPLAPCDWRGIVCTNNRVTELRLPRLQLSGRLTDQLPNLPMLRKLSIRSNFFNGTIPSSLSKCLFLRSVFLQYNSFSGGIPAEFGNMSNLRILNVAENHLSGVIPGDLPSSLRYLDLSSNAFSGQIPRSIVNMTQLQVVNLSFNMFGGEIPASFGELQELKHLWLDHNILEGTLPSALANCFSLVHLSVEGNALQGVIPAAIGALPNLQVISLSHNSLSGSVPYSMFCNVSTHPPSLRIVQLGFNGFTDIVKSQTATCFSALQVLDIQHNQITGEFPSWLTGVSTLTLLDFSVNHFSGQIPPGIGNLSGLQELRLANNSFHGAIPSEIKNFASISVIDFERNRLTGEIPPFLGYMRDLKQLSLGGNCFSGTVPASLGNLLALEILNLEDNGLNGTIPLELMGLGNLTAMELGGNEFSGEVPTGIGNLSRLEILNLSANSLSGMIPSSLGNLFKLTTLDLSKQNISGELPFELSGLPNLQVIALQENKLSGNVPEGFSSLMGLRYLNLSSNRFSGQIPSNYGFLRSLVSLSLSDNHISGSIPSELGNCSDLQILEVHSNALSGHIPADLSHLSHLLELDLGRNKLTGEIPEAISSCSSLESLHLNSNHLSGSIPESLSKLSNLTSLDLSSNNLSGVIPANLSSITGLASLNVSSNGLEGEIPPSLGSRFNSSSVFANNSDLCGKPLARNCKDTEKKDRMKRLILFIAVAASGACLLTLCCCFYIFSLLRWRKRLKEKASGEKKTSPARVSSAASGGRGSSENGGPKLVMFNNKITLAETIEATRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLSNGSLDENMFRKEAESLGKVRHRNLTVLRGYYAGPPDMRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIALGIARGLAFLHSSSIIHGDVKPQSVLFDADFEAHLSDFGLDRLTLTASTEASTSTLVGTLGYIAPEAVLTGEATKESDVYSFGIVLLEILTGKKPVMFTEDEDIVKWVKKQLQRGQITELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPRDRPTMSDIVFMLEGCRVGPDIPSSADPTSQLSPPNP 1135
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5823284 5826691 - Carg00604-RA Car03g00644 144696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00644 1135 ProSiteProfiles Protein kinase domain profile. 840 1120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00644 1135 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Car03g00644 1135 Pfam Leucine rich repeat 652 711 IPR001611 GO:0005515
Car03g00644 1135 Pfam Leucine rich repeat 528 567 IPR001611 GO:0005515
Car03g00644 1135 MobiDBLite consensus disorder prediction 798 812 - -
Car03g00644 1135 MobiDBLite consensus disorder prediction 793 820 - -
Car03g00644 1135 Pfam Protein kinase domain 850 1108 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00644 1135 Pfam Leucine Rich Repeat 166 187 IPR001611 GO:0005515
Car03g00644 1135 Pfam Leucine Rich repeat 625 646 IPR001611 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00644 Car-Chr3:5823284 Car17g00105 Car-Chr17:653769 5.38E-170 dispersed
Car07g00148 Car-Chr7:880748 Car03g00644 Car-Chr3:5823284 4.26E-15 dispersed
Car14g00028 Car-Chr14:179009 Car03g00644 Car-Chr3:5823284 1.30E-56 dispersed
Car18g00483 Car-Chr18:3228677 Car03g00644 Car-Chr3:5823284 1.36E-92 dispersed
Car16g00680 Car-Chr16:4321136 Car03g00644 Car-Chr3:5823284 4.26E-07 wgd
Car03g00644 Car-Chr3:5823284 Car07g00388 Car-Chr7:1963440 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88726 PF00069 Pkinase 6.30E-35 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00644 - - cmax:111478744 2092.0