Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00645 ATGAGGATACTCTGTGATTCCTGCGAAACTGCTGCAGCAACTTTGTTTTGTGCAGCTGACGAGGCTGCTCTCTGCACAGCCTGTGATGCAAAGGTGCACATGTGCAACAAGCTTGCGAGCCGCCATGTAAGGGTTGGGCTCGCAAATCCAAGCGAAGTTCCTCGCTGTGATATATGTGAGAATGCACCAGCTTTCTTTTGGTGTGAGATAGATGGGAGTTCCTTGTGCTTACAATGCGACGTGATTGTTCATGTGGGAGGTAAAAGAATGCACAAGAGATATCTTCGGCTGAGGCAGAGAGTTGAGTTTCCAGGGGATACACAAAATGATGTGAAGGGCCCAAATGCAAAGCCGATGGAACAGGTTGAGACAGTGAGAGGCCAGAATCAAGAAAGGGGTGAGGAGATTGAGAAGCAGGAAGAAGATTTGAGATTCTCTGGTGTTAAAGGGTATTCAAATGGAGATAGGCACTCCAAGCGGCCTAATAAAGTGATTGATTTGAACATTTAG 510 46.86 MRILCDSCETAAATLFCAADEAALCTACDAKVHMCNKLASRHVRVGLANPSEVPRCDICENAPAFFWCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDTQNDVKGPNAKPMEQVETVRGQNQERGEEIEKQEEDLRFSGVKGYSNGDRHSKRPNKVIDLNI 169
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5830640 5831512 + Carg00605-RA Car03g00645 144697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00645 169 Pfam B-box zinc finger 52 85 IPR000315 GO:0008270
Car03g00645 169 Pfam B-box zinc finger 4 42 IPR000315 GO:0008270
Car03g00645 169 MobiDBLite consensus disorder prediction 127 145 - -
Car03g00645 169 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Car03g00645 169 MobiDBLite consensus disorder prediction 105 169 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g00645 Car07g00389 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00645 Car-Chr3:5830640 Car16g00643 Car-Chr16:4091604 8.63E-73 dispersed
Car12g00406 Car-Chr12:2587799 Car03g00645 Car-Chr3:5830640 2.34E-20 wgd
Car03g00645 Car-Chr3:5830640 Car07g00389 Car-Chr7:1970360 1.16E-66 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3133 PF00643 zf-B_box 9.70E-06 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00645 - - csv:101206016 286.574