Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00648 ATGCAGCAGGGCCAGCAGCCGCAGCACCAGGCAATTCCAGGCAGCTGCAGCAGTTTGGTCACCCACGAATTCTGGGTCAGAGCAACAATGTCTGGCTTCTTCAGTTTAGGTGGAGGAGGAAGAGAAGACCACCAAGAGCATCAAGAGCATCAAGAGCATCAAGACCACCAAGAGCACCAACAAAACAACGACACAAACCCGGAGACCTTGTTTTGGTACAAGGGCAACGTGGAGCTATGGCAACAACAACACCACCACCACCACCAGCACCCTCAACAAGAACAGCCTCTCTTCCAAACCCAATCCCGGACTCCTTACTCCGCCGCACTACCCGATCCGGGGGAGGAGGAATCAGCTGCATCCTCCTCTTCTCTCGCCTGCACTCTCATCCCCAACAACACTTCTGGGTTAGAAATTGGGAATTTCCCGGCGGAGTTGAACTCACCAGCAGTATTCCGTTGCGTTCGTGTGAGCTCCACCGACGAATCCGACGATCAATACGCGTATCAAACGGCGGTCAATATCGGAGGACATGTTTTCAAGGGAATTCTATACGATCAAGGACCCGAAACTAATTACATTCCACCAGCTGAGACCTCATCCGGTGGTGGTGGTGGTGGTGGTGGTGGGAGTAGTAGTGGAGTGCAACCATTGAATTTCATCACCGGCGCAACGGATGCGACCACCGCAAGCGGTGGTTCCTCCGCCGCATTACCCTTACTCGATCCCTCCTCCTTATATTCAACGCCGCTGAATAGCTTCATGGCGGGTACGCAATTCTTCCTACCACCAAGATCTTAA 801 53.18 MQQGQQPQHQAIPGSCSSLVTHEFWVRATMSGFFSLGGGGREDHQEHQEHQEHQDHQEHQQNNDTNPETLFWYKGNVELWQQQHHHHHQHPQQEQPLFQTQSRTPYSAALPDPGEEESAASSSSLACTLIPNNTSGLEIGNFPAELNSPAVFRCVRVSSTDESDDQYAYQTAVNIGGHVFKGILYDQGPETNYIPPAETSSGGGGGGGGGSSSGVQPLNFITGATDATTASGGSSAALPLLDPSSLYSTPLNSFMAGTQFFLPPRS 266
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5844979 5846346 + Carg00608-RA Car03g00648 144700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00648 266 MobiDBLite consensus disorder prediction 104 123 - -
Car03g00648 266 MobiDBLite consensus disorder prediction 193 219 - -
Car03g00648 266 Pfam Domain of unknown function (DUF702) 86 190 - -
Car03g00648 266 MobiDBLite consensus disorder prediction 36 68 - -
Car03g00648 266 MobiDBLite consensus disorder prediction 40 62 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g00648 Car07g00399 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00648 Car-Chr3:5844979 Car19g00232 Car-Chr19:2337957 1.18E-31 dispersed
Car01g01515 Car-Chr1:12816384 Car03g00648 Car-Chr3:5844979 2.44E-26 wgd
Car12g00407 Car-Chr12:2598434 Car03g00648 Car-Chr3:5844979 9.79E-38 wgd
Car16g00675 Car-Chr16:4281795 Car03g00648 Car-Chr3:5844979 2.13E-25 wgd
Car03g00648 Car-Chr3:5844979 Car05g00232 Car-Chr5:1231740 9.45E-42 wgd
Car03g00648 Car-Chr3:5844979 Car07g00399 Car-Chr7:2030316 8.27E-57 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3135 PF05142 DUF702 3.40E-26 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00648 - - csv:101207689 238.039