Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car03g00656 | ATGGGCAAGCCTATGAGTTTTGTCGTTGTTTTTTCCCTTCTTGCCTTGGCTCCTCTCTGTTTCTCTAGCAGAAATGGCGGGTTTGGGTCTCTGTACCCGCAATATTATGACCACTCCTGCCCCCATGCTAAGGCAATAGTGAAATCCATTGTGGCAAAGGCTTTTGCTAGAGAAGCTCGTATTGCTGCTTCTATCCTTAGACTTCACTTTCATGACTGTTTTGTTCAGGGGTGTGATGCATCTTTACTACTGGACAGCAGTGGGAGCATTAGAAGCGAGAAGAATTCAAACCCAAATAGGAACTCGGCTAGAGGGTTTGAGGTGATTGATGAGATCAAATCTGCATTGGAGAAAGAGTGCCCACAAACTGTTTCTTGTGCTGATATCTTGGCTTTGGCTGCAAGAGATTCCACTGTCATTACGGGTGGACCCTTTTGGGAGGTTCCATTGGGAAGGAAAGACTCGAGAACTGCGAGCTTGAGTGGCTCCAACAACAACATTCCAGCTCCCAACAACACTTTCCAAACCATTCTCAACAGATTCCAAAACCAGGGCCTTGATATCGTTGATCTTGTCGCCTTATCTGGAGGTCACACCATCGGGAATTCAAGGTGCACCAGCTTCCGGCAGAGGCTATACAACCAGAACGGCAATGGACAGCCCGACAAAACCCTTCCCCAGCCGTACGCGGCCGAGCTTCGAAACCGCTGCCCGAGATCCGGCGGCGACAATAACCTCTTTTTCCTCGACTTCGTCAGCCCGACCAAATTCGACAACAGCTACTTCAAGAACATTGTTGGTTTCAAAGGGCTTCTCAACTCCGACCAAGTTCTCCTCACCGGAAACGACGCGTCGGCTGCTTTGGTAAAGAAATATGCCGACAACAGCGAGGTGTTCTTCGAGCAGTTCGCCAAATCCATGATCAAAATGGGCAATATTTCCCCATTGACGGGCTCAAATGGAGAGATCAGAAAGACTTGCAGGAAGATCAACAATTAA | 999 | 48.45 | MGKPMSFVVVFSLLALAPLCFSSRNGGFGSLYPQYYDHSCPHAKAIVKSIVAKAFAREARIAASILRLHFHDCFVQGCDASLLLDSSGSIRSEKNSNPNRNSARGFEVIDEIKSALEKECPQTVSCADILALAARDSTVITGGPFWEVPLGRKDSRTASLSGSNNNIPAPNNTFQTILNRFQNQGLDIVDLVALSGGHTIGNSRCTSFRQRLYNQNGNGQPDKTLPQPYAAELRNRCPRSGGDNNLFFLDFVSPTKFDNSYFKNIVGFKGLLNSDQVLLTGNDASAALVKKYADNSEVFFEQFAKSMIKMGNISPLTGSNGEIRKTCRKINN | 332 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 5882799 | 5884795 | - | Carg00616-RA | Car03g00656 | 144708 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car03g00656 | 332 | ProSitePatterns | Peroxidases active site signature. | 62 | 73 | IPR019794 | GO:0004601 | |
| Car03g00656 | 332 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 190 | 200 | IPR019793 | - | |
| Car03g00656 | 332 | ProSiteProfiles | Plant heme peroxidase family profile. | 30 | 331 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Car03g00656 | 332 | Pfam | Peroxidase | 47 | 295 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car03g00656 | Car-Chr3:5882799 | Car04g00711 | Car-Chr4:4118510 | 3.42E-108 | dispersed | |
| Car04g01615 | Car-Chr4:9331141 | Car03g00656 | Car-Chr3:5882799 | 2.17E-95 | dispersed | |
| Car06g00318 | Car-Chr6:1750065 | Car03g00656 | Car-Chr3:5882799 | 5.20E-70 | dispersed | |
| Car18g00994 | Car-Chr18:10411588 | Car03g00656 | Car-Chr3:5882799 | 8.02E-95 | dispersed | |
| Car18g00627 | Car-Chr18:7477508 | Car03g00656 | Car-Chr3:5882799 | 9.64E-06 | transposed | |
| Car16g00669 | Car-Chr16:4236763 | Car03g00656 | Car-Chr3:5882799 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car03g00656 | K00430 | - | csv:101204648 | 592.423 |