Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00676 GGGAAAAAAAAGATAAGAATTCTGGTCAAAACTCCCCCCAATATTCAAATTTCTTGTGAATTTCTGAACCACCAACCCCACAAGAGCAGAACCAAATCGGCCAAGATGAACGATTTGATGACGAAATCGTTCTTAAGTTATGTGGAATTGAAGAAACAGGCGCAGAAGGAAGCCGCATGCGGCGGCGGCTTCGACATTGAATCCGGCCGCCAAGAACTCAATCCGACGGAAGAACAGAACCTGTCTCTGTTTTTCGGACAAGTCGACGAAATCAAGACCCAAATGGAAGAGACAACCAATCTCTTGAACGACATTCAAAAACTAAATCAAGAAGCCAAATCAACCCACAACGCGAAAATCCTCCGCGGATTAAGAGACCGAATCGACTCCGATATGGTCTCAATCCTTCGCAGAGCAAAACTCCTTAAAGAAAAATTGGCCTCTCTCGACCAATCCAACGCCGTCAACCGCCTGGTATCCGTCGCATACGGCGAAGGAACCACCGTGGACCGGACAAGATCTTCAATCACCAACGGACTGAGAGTGAAATTGAGAGAAATGATGATGGAATTCCAGTGTTTGAGAGAAAAAGTTGTGGCGGATCACAAGGAGGATTTGAGAAGAAGATATTTTAGTGCAAATGGGGAACAACCCAGTGAAGAACAGATTGAGAAGATTATGTCTGGGAGTCTGAAATTGGATTCGTTTGGAGGGAATTTGAGCGAGGCCGAGTTGAGAGACCGAGTCAGGCACGAGTCAGTGATGGATATACAGAGGAGTTTGAATAAACTTCATCAAGTGTTTTTGGATATGGCGATTCTGGTTGAGAGTGAAGGGGAGAAGATAGAGAACATTGAGGAGAATGTGGCGAAAGCTGGGAAGTTCATCAATGGCGGAACTCGAAGCCTTTACTATGCGAACCAGATGAAGAGGAAGAACAAGAAGTGGGTGTATTGGATTTGGGCCGTCATTTTTGTTATATTGCTTATTTGCATTGTTTCAATGTTGGTCATTTAA 1017 44.54 GKKKIRILVKTPPNIQISCEFLNHQPHKSRTKSAKMNDLMTKSFLSYVELKKQAQKEAACGGGFDIESGRQELNPTEEQNLSLFFGQVDEIKTQMEETTNLLNDIQKLNQEAKSTHNAKILRGLRDRIDSDMVSILRRAKLLKEKLASLDQSNAVNRLVSVAYGEGTTVDRTRSSITNGLRVKLREMMMEFQCLREKVVADHKEDLRRRYFSANGEQPSEEQIEKIMSGSLKLDSFGGNLSEAELRDRVRHESVMDIQRSLNKLHQVFLDMAILVESEGEKIENIEENVAKAGKFINGGTRSLYYANQMKRKNKKWVYWIWAVIFVILLICIVSMLVI 338
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6006696 6007783 + Carg00636-RA Car03g00676 144728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00676 338 Coils Coil 88 115 - -
Car03g00676 338 Pfam Syntaxin 84 279 IPR006011 GO:0016020
Car03g00676 338 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 244 306 IPR000727 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00676 Car-Chr3:6006696 Car13g00552 Car-Chr13:7435500 1.40E-63 dispersed
Car03g00676 Car-Chr3:6006696 Car07g01140 Car-Chr7:6851525 6.77E-71 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00676 K08486 - csv:101217836 511.531