Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00698 ATGGGGACAGGGGAAGAGGGCACGCCTTCTAAAACTTCCAAGCCTCTCTCTTCATCTCAGGACATAGCTCCGGCACCTTCATATCCTGATTGGTCAAGCTCAATGCAGGCTTATTATGGTGCTGGTGCTACTCCACCTCCCTATTTTGCGTCTACTGTTGCTTCTCCAACTCCCCACCCTTACATTTGGGGAGGGCAGCATCCTTTGATGCCACCATATGGGACTCCAGTTCCTTATCCAGCTATATATCCTCCTGGGGGAGTTTATGCCCACCCCAATATCACCGTGACTCCTGGCTCAGCCCCAATTAATGCAGAATATGAAGGAAAGTCCCCGGATGGAAAAGAAAGGGCCTCAAAAAAATCCAAGGGCACGTCAGGAAATACCGGTTCAGGTGGTGGTAGGACCGGGGATAGTGGAAAGGTGGCTTCAAGTTCTGGAAATGATGGTGCTTCTCAAAGTGCTGATAGTGGTACTGAGGGGTCATCAGAAGGCAGTGACGAGAACGCTAACCAACATGAATTGTCTGCAAATAAGAAGGGAAGCTTCAACCAGATGCTGGCTGATGGAGCCAATGCACAAAACAACACGGGGGGACCAAATGCCAAATCTTCAGTAACTGGGAAACCCATCACCTCCATTCCTGGAACTAATCTGAACATGGGAATGGATTTGTGGAATAACACCACGGGTGCTTCAGGGGCTGGAAAAGTGAGAGCGAATGCCGTCTCCTCAGCCATTGGTCCAACACCGATGGTTGGTCGTGATGGTGTGATGCCTGAGCAATGGGTTCAAGACGAACGTGAGCTGAAAAGGCAGAAAAGGAAGCAATCTAACCGAGAGTCTGCCAGGAGGTCAAGATTACGCAAGCAGGCGGAGTGTGAAGAATTACAGGCGAGAGTGCAGACATTGAACAACGAGAATCGTACTCTTAGGGATGAGCTGCAGAGGCTCTCCGAGGAATGTGAAAAGCTAACATCAGAAAATAGTTCCATCAAGGAAGAATTGACACGATTTTGTGGACCAGAAGCATTAGCCAACTTTGAAAAAGGAATCGCTGCTCCTGCTGCCCAATCTCGTGACGACGAGGGTAAGGATTAA 1101 49.32 MGTGEEGTPSKTSKPLSSSQDIAPAPSYPDWSSSMQAYYGAGATPPPYFASTVASPTPHPYIWGGQHPLMPPYGTPVPYPAIYPPGGVYAHPNITVTPGSAPINAEYEGKSPDGKERASKKSKGTSGNTGSGGGRTGDSGKVASSSGNDGASQSADSGTEGSSEGSDENANQHELSANKKGSFNQMLADGANAQNNTGGPNAKSSVTGKPITSIPGTNLNMGMDLWNNTTGASGAGKVRANAVSSAIGPTPMVGRDGVMPEQWVQDERELKRQKRKQSNRESARRSRLRKQAECEELQARVQTLNNENRTLRDELQRLSEECEKLTSENSSIKEELTRFCGPEALANFEKGIAAPAAQSRDDEGKD 366
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6103484 6107604 - Carg00658-RA Car03g00698 144750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00698 366 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 274 289 IPR004827 GO:0003700|GO:0006355
Car03g00698 366 Coils Coil 280 335 - -
Car03g00698 366 PANTHER G-BOX-BINDING FACTOR 1 1 364 - -
Car03g00698 366 MobiDBLite consensus disorder prediction 100 215 - -
Car03g00698 366 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 269 332 IPR004827 GO:0003700|GO:0006355
Car03g00698 366 MobiDBLite consensus disorder prediction 266 292 - -
Car03g00698 366 MobiDBLite consensus disorder prediction 123 215 - -
Car03g00698 366 CDD bZIP_plant_GBF1 272 322 IPR045314 GO:0003700|GO:0006355
Car03g00698 366 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 364 IPR044827 GO:0003700|GO:0006355|GO:0043565
Car03g00698 366 MobiDBLite consensus disorder prediction 1 28 - -
Car03g00698 366 SUPERFAMILY Leucine zipper domain 270 326 IPR046347 GO:0003700|GO:0006355
Car03g00698 366 Pfam bZIP transcription factor 267 329 IPR004827 GO:0003700|GO:0006355
Car03g00698 366 Gene3D - 270 325 - -
Car03g00698 366 SMART brlzneu 267 331 IPR004827 GO:0003700|GO:0006355
Car03g00698 366 Pfam G-box binding protein MFMR 1 94 IPR012900 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g00698 Car07g00439 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01399 Car-Chr2:9195983 Car03g00698 Car-Chr3:6103484 5.37E-53 dispersed
Car03g00698 Car-Chr3:6103484 Car06g00559 Car-Chr6:3160924 1.45E-69 dispersed
Car03g00698 Car-Chr3:6103484 Car07g00439 Car-Chr7:2224683 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3140 PF07777 MFMR 6.70E-33 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00698 K09060 - csv:101217128 645.58