Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00714 ATGGCGGGTCAACCGTCAGATTCTTCCCCTCTTATTCCACCGGCTCCGATCAGCGACCCCAGTGAGATCGACCTCGAAGCCGGCCAAGGGGAGCAAATACAATGTAGAATTTGCCTCGAGACCGATGGTAGGGATTTTATTGCTCCGTGCAAATGCAAGGGGACATCAAAGTATGTTCATCGAGAATGTCTGGATCATTGGCGGGCTGTGAAGGAAGGATTTGCTTTTGCTCATTGTACCACATGTAAGGCCCCTTACCATTTGAGAGTACATGCTGTTGCTGACAGGAAATGGCGAACCCTGAAATTTCGATTTTTTGTGACTAGAGACATTGTATTTATATTTTTGGCGGTTCAGCTTGTAATTGCTTCTCTGGGATATTTGACGCATTTTGTAGATGGTTTTCAACATTACTGGCTTCGTCTTACGTGGGGTTTTGATAACAAAATTAGTTTTTATTACATATGTGGAGCTTTATTATTTTTTGCATTGCTCGGCTTATCTGGATGCTTCATCACTTGTTATGATCGGAGAGTTAGGAATGATTTGGCTCAGCCATGTAGAGAATTGTGTCTATGTTGTTGCCACCCTGGGTATAAATCTATTGTTTCACAACTATGTGCTGACTGTCATTTGCCTGGTACTCTTTGTATGTGGACTGACTGCACCACTTGCTTCGAAAGTTGTGGAAGCATAGCAACCGAATGTGGATGCCTAGGAGGTGCTGGTGAAGCAGGACTGCCATTATTATTTATAATGGCCTTGATTGTTCTTGGTTTGTTCACAGTGATTGGTATCTTCTACAGCGTCTTGGTAGCTACCATGGTCGGACAACGAATATGGCAACGACACTATCACATACTTGCAAAAAGAATGCTTACAAAGGAATATGTTGTGGAAGATGTAGATGGGGAGATGACAGGATCTGAATGGTTACCTCCACCACTTCCAGCTGAGCACGTTCAACAACTGAAAACTCTTGGCCTTTTATGA 993 43.4 MAGQPSDSSPLIPPAPISDPSEIDLEAGQGEQIQCRICLETDGRDFIAPCKCKGTSKYVHRECLDHWRAVKEGFAFAHCTTCKAPYHLRVHAVADRKWRTLKFRFFVTRDIVFIFLAVQLVIASLGYLTHFVDGFQHYWLRLTWGFDNKISFYYICGALLFFALLGLSGCFITCYDRRVRNDLAQPCRELCLCCCHPGYKSIVSQLCADCHLPGTLCMWTDCTTCFESCGSIATECGCLGGAGEAGLPLLFIMALIVLGLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGSEWLPPPLPAEHVQQLKTLGLL 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6204067 6208792 + Carg00674-RA Car03g00714 144766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00714 330 Pfam RING-variant domain 35 82 IPR011016 GO:0008270
Car03g00714 330 ProSiteProfiles Zinc finger RING-CH-type profile. 27 89 IPR011016 GO:0008270
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00714 Car-Chr3:6204067 Car10g00537 Car-Chr10:2695129 3.60E-45 dispersed
Car03g00714 Car-Chr3:6204067 Car11g00431 Car-Chr11:2411713 3.76E-57 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00714 - - csv:101214008 648.277