Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00777 ATGGCGAAATCACCGGCCGAAGAGCACCCTAAGAAGGCTTTTGGATGGGCTGCCAGAGATGCCTCCGGCGTTCTTTCTCCATTTAATTTCTCCCGAAGAGAAACAGGGGACAATGATGTAGCTTTTAAAGTTCTTTACTGTGGGATATGCCATTCTGATCTTCACATGTTGAAAAACGAGTGGGGCAATACCATTTACCCTATTGTTCCTGGGCATGAAATCGCGGGTGAGGTAACAGAGGTTGGAAGCAAAGTAAAGAATTTCAAGGTTGGAGACAGAGTGGGCGTAGGGTGTATGGTCGGATCCTGCCGCTCCTGTGATAGCTGTTCCAACGACCTTGAGAACTATTGCCCAAAAATGATTCTCACCTACTCCGCCAAGGACTCCGATGGCACCATAACCTACGGTGGCTACTCCGACTGTATGGTCGCCAACGAGCACTTCATCGTTCGCATTCCTGACAGCATCCCTCTGCACGCGGGGGCTCCGCTGCTTTGCGCTGGTATCACGGTTTACAGCCCCTTGCGATACTATGGACTTGACAAGCCTGGAATGAAAATCGGCGTGGTTGGCCTCGGAGGGCTTGGCCATGTAGCTGTCAAATTTGCCAAGGCCCTTGGCGCTAAGGTCACTGTGATTAGCACCTCGCCTAACAAGAAGCAGGAGGCTATTGAACGTCTTGGGGCTGATTCATTCTTGGTCAGCCGTGATCAAGAGCAGATGCAGGCTGCTAAGGGGACGTTGGATGGTATCATAGACACAGTCTCTGCCTCACATCCCCTGCTTCCTCTGCTTTCTCTTGTGAAAACACATGGAAAGTTTGTTCTGGTCGGTGCACCAGAGAAGCCTCTCGAGGTCCCAGCCTTCGCTCTTATTGGGGGTAGGAAAACATTGTCGGGTAGTTGCATTGGAGGGATTAAGGAAACGCAAGAGATGATTGATTTTGCGGCCAAACACAACATAACTGCGGATGTTGAGGTGATTCCGATCGCCGATGTCAACACTGCCATGGAGCGTATGATAAAACAGGATGTCAAATATCGATTCGTCATCGACATTGGCAACACAATGAAGCCTAGCACTTAA 1086 50.09 MAKSPAEEHPKKAFGWAARDASGVLSPFNFSRRETGDNDVAFKVLYCGICHSDLHMLKNEWGNTIYPIVPGHEIAGEVTEVGSKVKNFKVGDRVGVGCMVGSCRSCDSCSNDLENYCPKMILTYSAKDSDGTITYGGYSDCMVANEHFIVRIPDSIPLHAGAPLLCAGITVYSPLRYYGLDKPGMKIGVVGLGGLGHVAVKFAKALGAKVTVISTSPNKKQEAIERLGADSFLVSRDQEQMQAAKGTLDGIIDTVSASHPLLPLLSLVKTHGKFVLVGAPEKPLEVPAFALIGGRKTLSGSCIGGIKETQEMIDFAAKHNITADVEVIPIADVNTAMERMIKQDVKYRFVIDIGNTMKPST 361
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6486582 6488547 + Carg00738-RA Car03g00777 144829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00777 361 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
Car03g00777 361 Pfam Alcohol dehydrogenase GroES-like domain 38 151 IPR013154 -
Car03g00777 361 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01557 Car-Chr1:13001709 Car03g00777 Car-Chr3:6486582 1.64E-139 dispersed
Car02g00411 Car-Chr2:3216163 Car03g00777 Car-Chr3:6486582 5.66E-160 dispersed
Car02g00709 Car-Chr2:5244869 Car03g00777 Car-Chr3:6486582 3.52E-112 dispersed
Car03g00777 Car-Chr3:6486582 Car16g00304 Car-Chr16:1873847 1.63E-121 dispersed
Car03g00777 Car-Chr3:6486582 Car20g00941 Car-Chr20:10326946 2.26E-118 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00777 - K23232 csv:101222715 671.003