Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00809 ATGAATAATGTTAATGGCAACAACTGTGACTGGCTAGGCTTCTCTGTCTCCCCTAACGTTAGCATGGAGCTTTCTTCTTCCTCTGCTACTGCTGTCTCCTCTTCAATTCCTGCAAATCTTTTTCACTCCCCATCACAATTTAACTATGGCATTTGCTATGGCGTTGATGGAGAAAATGGTGGCTTTTATTCACCATTGTCTGCCATGCCACTCAAGTCAGATGGCTCAATTTGTTCAATGGAATCACTCAGCAGGCAGCATCCACAAGTGGCGAGTAGCTCTACTCCAAAACTAGAGGATTTCTTCGGTGGCGCAACTATGGGGTCCCATCACTATGAAAGCAATGGCAGGGAAGCTATGGCTCTCAGCCTCGACAGCATTTTTTGCCATCAAAACCCAACTCATGAGCCCAACAACCAACCCTTTGCGCATTTCTCATCCTTGAGAAGCCGTGAAGGGATGCTTCAAGACTCGAAGGTAATCCTGCCTGATGGGTGCAATCTGCAGCAGCAGCAGCACCCACCAGCAGTGATAGAGACTAAGAATTCTGGTCTGAATTGGGCTGTTCCTAGGAACTATGCAGTCGCTAATAATGGTTCGTTCGAGCAGAAGATGGTGAGTTTCATGAGTGAAAATGGTGGAGAATCTGGTCCCATTAATGCCATGGCTTATGGAGATTTACATTCATTGAGCTTGTCCATGACTATGAGCCCCAGCTCTCAGTCAAGCTGTGTTACAGCCACACAGCATGCTTCACCTGCCCTGGCAGACTGTTCTGCTGTGGATACAAAGAAAAGAGGCCATGAGAAGCTTGATCAGAAGCAAATTGTTCATAGGAAGTCTTTAGACACTTTTGGACAGAGAACCTCCCAGTACAGAGGGGTTACAAGGCACAGATGGACGGGTAGGTATGAAGCACATTTGTGGGATAACAGTTGCAAGAAAGAAGGTCAAAGCAGGAAGGGAAGGCAAGGAGGTTATGATATGGAAGAAAAAGCCGCCAGAGCTTATGATCTTGCTGCACTCAAGTATTGGGGACCCTCCACCCATATCAACTCTCCTGTGGAGAACTATCAGAAAGAATTAGAGGAAATGAAAAACATGAGCAGGCAGGAATATAAGAAGCAGTGGATTCTCAAGAGGAGCCTCAATTTACAGAGGCGTAACAAGACATCATCAACATGGAAGATGGCAGGCTCGGATTGGGCGAGTACTCAAGAGGAAGCAGCCGAAGCCTATGACATAGCAGCCATCAAATTTCGAGGAATGAATGCGGTTACTAATTTCAATATCACGAGGTATGATGTGGAGCGGATCATTGCAAGCAATACCCTTCTTAGTGGCGATCTAGCTAAGAGAAAGCAGCAGCCTGAGTTTGATAATGAATCACTTAGACAAACCCCTCCTACTCACAACAGCAATTCAGAAGCTCTTCCTTTGCCCACTCAGAGTAATCAAAGTGAATCAGAATGGAAGATGGCTCTTTATCAGTCGTCGCAACAGCTCATTCCAAAACCACGATTGCCGTCTGCTATAACCGATGATGGATCACAACTCGGAGTCGAAGACTCGGCCAGAATGGGAGCTCATTTCTCCAATGCATCTTCAATTGTGACCAGCTGCAGCTTTAGCAGCTCGAGGGAGGAGAGTCCAGACAAGACGAGCCTTTCAATGGTGTTTGGAATGCCTCAATCGACGTCTAAGCCATTTGCTACCTCTGGTAGTAATATGAACTCCTCCTCCTGGATTGCATCTGCCCAGCAGTTGAGGGCAGCAAATTGTATGAGCCAGTTGCCAGTGTTTGCTGCCTGGTCTGATAGTTGA 1824 46.66 MNNVNGNNCDWLGFSVSPNVSMELSSSSATAVSSSIPANLFHSPSQFNYGICYGVDGENGGFYSPLSAMPLKSDGSICSMESLSRQHPQVASSSTPKLEDFFGGATMGSHHYESNGREAMALSLDSIFCHQNPTHEPNNQPFAHFSSLRSREGMLQDSKVILPDGCNLQQQQHPPAVIETKNSGLNWAVPRNYAVANNGSFEQKMVSFMSENGGESGPINAMAYGDLHSLSLSMTMSPSSQSSCVTATQHASPALADCSAVDTKKRGHEKLDQKQIVHRKSLDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQSRKGRQGGYDMEEKAARAYDLAALKYWGPSTHINSPVENYQKELEEMKNMSRQEYKKQWILKRSLNLQRRNKTSSTWKMAGSDWASTQEEAAEAYDIAAIKFRGMNAVTNFNITRYDVERIIASNTLLSGDLAKRKQQPEFDNESLRQTPPTHNSNSEALPLPTQSNQSESEWKMALYQSSQQLIPKPRLPSAITDDGSQLGVEDSARMGAHFSNASSIVTSCSFSSSREESPDKTSLSMVFGMPQSTSKPFATSGSNMNSSSWIASAQQLRAANCMSQLPVFAAWSDS 607
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6661442 6664418 - Carg00770-RA Car03g00809 144861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00809 607 MobiDBLite consensus disorder prediction 461 489 - -
Car03g00809 607 Coils Coil 355 375 - -
Car03g00809 607 Pfam AP2 domain 291 346 IPR001471 GO:0003700|GO:0006355
Car03g00809 607 ProSiteProfiles AP2/ERF domain profile. 364 430 IPR001471 GO:0003700|GO:0006355
Car03g00809 607 MobiDBLite consensus disorder prediction 451 489 - -
Car03g00809 607 ProSiteProfiles AP2/ERF domain profile. 291 354 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00809 Car-Chr3:6661442 Car01g00029 Car-Chr1:147113 2.09E-81 dispersed
Car01g01376 Car-Chr1:12078855 Car03g00809 Car-Chr3:6661442 1.85E-114 wgd
Car12g00555 Car-Chr12:3699394 Car03g00809 Car-Chr3:6661442 1.38E-128 wgd
Car03g00809 Car-Chr3:6661442 Car05g00104 Car-Chr5:544015 7.15E-135 wgd
Car03g00809 Car-Chr3:6661442 Car07g00553 Car-Chr7:2818030 0 wgd
Car03g00809 Car-Chr3:6661442 Car09g00261 Car-Chr9:1428446 3.40E-29 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3154 PF00847 AP2 3.90E-10 CL0081 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00809 K09285 - csv:101203323 1007.67