Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00830 ATGGGGAAGAAACAGCACAGTAAAGACCGTTTGTTTATTACGAAAACTGAATGGGCAACCGAATGGGGTGGCGCCAAACCCAAGGACTCTCAAACCCCTTTCAAACGGCTTCCTTTCTATTGCTGCGCACTTACATTTACACCCTTCGAGGACCCTGTATGTACCGCCGATGGCAGCGTCTTCGAGATAATGAATATCATCCCTTATATTCGAAAGTATGGTAAAAATCCTGTTACTGGAGCTTCCCTAAAGCAGGAGGATCTAATTCCGCTGATTTTCCACAAGAATTCTGAAGGTGAGTTCCAGTGCCCTGTACTAAACAAAGTTTTTACGGAGTTCACACACATAGTTGCTATAAAGACCACTGGAAATGTCTTCTGCTACGAGGCAGTTACAGAATTAAATATCAAGACAAAAAACTGGAAGGAACTTCTTACTGATGAACCATTTAGTAGGCAAGACATTATAACCATTCAGAACCCTACTGCGCTTGATAGTAAGGTTCTCCTGGATTTTGATCATGTGAAGAATAGCCTGAAAGTTGATGATGAAGATCCAACATATTTCATAAATGTGTCGGGCGACATCAAGCAGATGCTGCAGGAACTTGGAACCGAAAAAGGCAGGCAAACTGCACTTCATGGCAGAGGTGGTGGCAAGGCACAGAAAGAAAGGGGGGCTGCACTTGCTGCAATTTTAGCTGCTAGGTCACGCATTAAAGAGGACTCCAAGGAGAATGCAAAAGGAGAGGAGAAACCTACTCAGGCATTTAGTATTGTGGATGCTGCATCTGCCTCGGTACATGGTAGAAGTGCTGCTGCTGCGAAAGCTGCACCAAGTGAAAAAACTGCTGCTCGAATTGCGATGCACATGGCGGGTGAGAGGGCACCAGTGAATGCTAAGATGGTAAAGAGTCGTTACACTACTGGTGCTACGTCCCGATCCTTCACATCTACAGCTTATGATCCTGTTACAAAGAATGAACATGAATATATCAAGGTTGAGAAAAATCCGAAGAAGAAAGGATATGTACAGTTGCATACAACACATGGAGATTTGAATATTGAACTGCATTGTGATATTACTCCGAGGGCATGTGAGAATTTCATCACGCTTTGTGAAAATGGCTACTACAATGGAGTTGCTTTTCATAGAAGTATTAGGAATTTCATGATTCAAGGTGGTGATCCAACTGGTACTGGGAGAGGAGGGGAATCTATATGGGGAAAGCCCTTCAACGATGAACTGAACTCTAAGTTGCTTCATTCTGGAAGGGGTGTTGTCAGTATGGCAAATAGTGGCCCCCACACTAATGGTTCCCAGTTCTTTATTCTTTACAAATCTGCTAATCACTTAAACTTCAAGCATACTGTATTTGGCGGTGTTGTTGGTGGGTTGACTGCTTTGGCAGCCATGGAAAAGGTTCCTGTTGATGACAATGATCGGCCTCTGGAAGAGATCAAGATAACAAGCGTCACAGTTTTTGTCAATCCATACTCAGAACCCGATGAAGAAGAGGAAGAAAAGCAAAAAGACGAGAAAAATGTGGAGGATGAGGAAAACGATAAGGTTGGATCGTGGTATAGTAATCCAGGCACCGGGGTAGCTGAATATGGAGCTGCTGCTGGTGGTGGTGGTGTAGGGAAATATTTAAAAGCAAGGAATGCCCAATCCAAATCCCCTGCTGTTGATGCTGGTGTAAGACAAACTACCTCAACCAAAAAAAGGACAGCTGCTGGAGAATTCAAAGACTTCTCTTCGTGGTAA 1767 43.75 MGKKQHSKDRLFITKTEWATEWGGAKPKDSQTPFKRLPFYCCALTFTPFEDPVCTADGSVFEIMNIIPYIRKYGKNPVTGASLKQEDLIPLIFHKNSEGEFQCPVLNKVFTEFTHIVAIKTTGNVFCYEAVTELNIKTKNWKELLTDEPFSRQDIITIQNPTALDSKVLLDFDHVKNSLKVDDEDPTYFINVSGDIKQMLQELGTEKGRQTALHGRGGGKAQKERGAALAAILAARSRIKEDSKENAKGEEKPTQAFSIVDAASASVHGRSAAAAKAAPSEKTAARIAMHMAGERAPVNAKMVKSRYTTGATSRSFTSTAYDPVTKNEHEYIKVEKNPKKKGYVQLHTTHGDLNIELHCDITPRACENFITLCENGYYNGVAFHRSIRNFMIQGGDPTGTGRGGESIWGKPFNDELNSKLLHSGRGVVSMANSGPHTNGSQFFILYKSANHLNFKHTVFGGVVGGLTALAAMEKVPVDDNDRPLEEIKITSVTVFVNPYSEPDEEEEEKQKDEKNVEDEENDKVGSWYSNPGTGVAEYGAAAGGGGVGKYLKARNAQSKSPAVDAGVRQTTSTKKRTAAGEFKDFSSW 588
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6747321 6750604 + Carg00791-RA Car03g00830 144882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00830 588 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 347 494 IPR002130 GO:0000413|GO:0003755
Car03g00830 588 MobiDBLite consensus disorder prediction 554 588 - -
Car03g00830 588 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 378 395 IPR020892 GO:0003755|GO:0006457
Car03g00830 588 MobiDBLite consensus disorder prediction 498 531 - -
Car03g00830 588 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 343 494 IPR002130 GO:0000413|GO:0003755
Car03g00830 588 MobiDBLite consensus disorder prediction 562 576 - -
Car03g00830 588 ProSiteProfiles U-box domain profile. 35 108 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01337 Car-Chr1:11892010 Car03g00830 Car-Chr3:6747321 1.46E-43 dispersed
Car03g00830 Car-Chr3:6747321 Car06g00961 Car-Chr6:7390403 2.72E-56 dispersed
Car03g00830 Car-Chr3:6747321 Car07g00574 Car-Chr7:2908569 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00830 K10598 - csv:101204462 1025.0