Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00831 ATGGATACCTTGTTTCGGCTTGTCAATCTCCAATCTGAGCAATCTTACAATTCCAGCAGGACCAATTCTAGCAGCTCTAGATCTTCCAGACAGAACCAATATCAGTACCATCAACAGGACGACGACCAAGAATGCTACAACCTTCTCATGGATGACGAAGATTTCTCATCCTCTAGTAATTCTAGACAATACTATAATCCATACCATCCACACCCACCTTCCACCGCCACTCCCACACCCATCGATCAATTCTCATACGTCTCCCCCTCTCCCGACATCAACTTCGAATTTTCCGGCAGGTGGGCTGTTGATATTCTCCTTGAGACGGCCAGGGCTATTTCTGAGAGGAACAGCGCCCGCGTTCACCATCTCATGTGGATGCTAAACGAACTTAGCTCCCCCTATGGGGATACGGATCAAAAGCTGGCTGCCTATTTCCTGCAGGCCTTGTTTAGCCGCATGACAGATTCCGGCGACCGTAATTATTGCGCTTTGGCCTCTGCCTCAGAGAAAACATGCTCATTCGATTCAACTAGGAAAGTGATGCTCAAGTTTCAGGAGGTTAGCCCCTGGACCACTTTTGGGCATGTTTCTTGCAATGGCGCATTAATTGAGGCCTTAGAAGGCGAATCGAAGCTACACATAATCGATATCAGTAGCACGTATTGCACTCAGTGGCCTACTTTGCTAGAAGCTCTCGCGACTCGTACGGACGACACGCCGCACCTTCGTCTCACCACGATCGTCACCACCAAGCCCGGTAATGGAACCGGAGTGTCTGCATCTCAAAAAGTAATGAAGGAAATAGGTACGAGAATGGAAAAGTTCGCTAGGCTTATGGGCGTACCTTTCAAATTCAGTGCTCTGTACCATTCTGGTGACCTTTCGGAATTGGACTTCGCCAAATTAGATATCAAAGAAGACGAGGCACTTGCCATCAACTGCGTCGGAGCCTTACGTTCCATTACGGCGATTAACAACCGCCGAGATTTTTTGATTTCGTCTTTCCGCAGTTTACGCCCGAGGATAATCACAGTGATAGAAGAGGAAGCCGATCTCGACGTAGGCGTCGATGGGACTGAATTTCTGAGAGGTTTCCAAGAATGTTTGCGTTGGTTTAGGGTTTACTTCGAGACATTGGACGAAAGTTTCACGAGGACGAGCAACGAGCGGTTGATGCTCGAGAGAGCTGCCGGTAGGGCAATCGTGGACCTGGTGGCTTGCTCTGCGGCCGACTCGGTTGAGAGGCGGGAATCGGCGGTGAGGTGGGCTCAGCGGCTGCATGGAAACGGATTCAGTCCGGTGACGTTCAGCGACGAAGTATGCGACGACGTCAGAGCGCTGTTGAGGAGATACAAGGAAGGATGGGCAATGACACAGAACTCCGACGTCGCCGGAATATTCTTGACGTGGAAAGAGCAGCCGGTGGTGTGGGCCAGTGCATGGAGACCTTGA 1455 50.45 MDTLFRLVNLQSEQSYNSSRTNSSSSRSSRQNQYQYHQQDDDQECYNLLMDDEDFSSSSNSRQYYNPYHPHPPSTATPTPIDQFSYVSPSPDINFEFSGRWAVDILLETARAISERNSARVHHLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYCALASASEKTCSFDSTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIIDISSTYCTQWPTLLEALATRTDDTPHLRLTTIVTTKPGNGTGVSASQKVMKEIGTRMEKFARLMGVPFKFSALYHSGDLSELDFAKLDIKEDEALAINCVGALRSITAINNRRDFLISSFRSLRPRIITVIEEEADLDVGVDGTEFLRGFQECLRWFRVYFETLDESFTRTSNERLMLERAAGRAIVDLVACSAADSVERRESAVRWAQRLHGNGFSPVTFSDEVCDDVRALLRRYKEGWAMTQNSDVAGIFLTWKEQPVVWASAWRP 484
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6753922 6755376 + Carg00792-RA Car03g00831 144883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00831 484 MobiDBLite consensus disorder prediction 55 70 - -
Car03g00831 484 MobiDBLite consensus disorder prediction 15 39 - -
Car03g00831 484 MobiDBLite consensus disorder prediction 55 83 - -
Car03g00831 484 Pfam GRAS domain family 103 483 IPR005202 -
Car03g00831 484 ProSiteProfiles GRAS family profile. 93 483 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00831 Car-Chr3:6753922 Car08g00174 Car-Chr8:1056709 1.25E-151 dispersed
Car03g00831 Car-Chr3:6753922 Car03g00840 Car-Chr3:6801737 3.47E-51 proximal
Car02g00371 Car-Chr2:2760947 Car03g00831 Car-Chr3:6753922 0 transposed
Car08g00679 Car-Chr8:4354654 Car03g00831 Car-Chr3:6753922 2.17E-43 transposed
Car03g00831 Car-Chr3:6753922 Car07g00575 Car-Chr7:2915594 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3160 PF03514 GRAS 9.30E-104 CL0063 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00831 - - csv:101204711 846.269