Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00839 ATGAGTTGCAACGGTTGCCGCGTTCTTCGAAAGGGCTGTAGCGAGTCCTGTATTCTTCGCCCTTGCTTGCAGTGGATTGAGACCTCCGAGGCCCAAGGCCACGCCACTGTCTTCGTCGCCAAGTTCTTCGGCCGCGCCGGCCTTATGTCCTTCATCTCCGCTGTCCCCGAATCTCAGCGACCTTCTTTGTTTCAGTCTTTGTTGTTCGAAGCCTGTGGACGCACTGTTAATCCCGTCAACGGTGCCGTTGGACTTCTTTGGACTGGCAACTGGCATGTTTGTCAAGCCGCCGTTGACACCGTCTTACGAGGCGGCACGTTGCGGCCGATCAACGATTTCCTCGCCGCTGGTTCTCCCAATCTGTCCTCCGACGACACTTCCGAGGCTGAAGTCGCCTGTACCGACATGTGGAAGCTACGAGATTCTTATCCCAATTCACGATTCTCCAACTCCCGATCCAGGCTCTCTCCGAAACGCAAGCGATCCGAGGAATCATCCACCAAGAACCAACTGAACGACCTAAATCTCCGGTTGACGCCTACTTTCGTATCCAAATCAACCCCGCGCGCCGCTACACCGTCGATGAATTCCGAGGAATCCGAGACCACTACGTGCTTCGAGAGTGGCCTGGGGGATCACCATCACTACTATCCAGAAGAAGGAACCGCCCAACGGAAGCTTCTCAATTTGTTCGTCTAA 699 54.94 MSCNGCRVLRKGCSESCILRPCLQWIETSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVDTVLRGGTLRPINDFLAAGSPNLSSDDTSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESSTKNQLNDLNLRLTPTFVSKSTPRAATPSMNSEESETTTCFESGLGDHHHYYPEEGTAQRKLLNLFV 232
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6795366 6796493 + Carg00800-RA Car03g00839 144891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00839 232 MobiDBLite consensus disorder prediction 146 206 - -
Car03g00839 232 MobiDBLite consensus disorder prediction 168 206 - -
Car03g00839 232 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 232 - -
Car03g00839 232 Pfam Lateral organ boundaries (LOB) domain 2 100 IPR004883 -
Car03g00839 232 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 232 - -
Car03g00839 232 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g00839 Car07g00582 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00839 Car-Chr3:6795366 Car14g00743 Car-Chr14:4170324 8.25E-54 dispersed
Car01g01399 Car-Chr1:12199842 Car03g00839 Car-Chr3:6795366 1.94E-61 wgd
Car03g00839 Car-Chr3:6795366 Car07g00582 Car-Chr7:2957023 1.04E-154 wgd
Car03g00839 Car-Chr3:6795366 Car09g00237 Car-Chr9:1307442 7.34E-61 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3163 PF03195 LOB 3.30E-25 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00839 - - csv:101206615 416.387