Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00841 ATGGGTCGCTTCAACCTCCTCATTGCACTATCTCTTCTTTCTTTGTTCGTCTTTCCTTCTCCAACCCTCGCCCAACTCCGACAAAACTTCTACGCCAACATCTGCCCCAATGTCGAGAACATTGTCCGCTCCCAAGTTACCAAGAAATTTCAACAGACATTCGTCACTGTTCCCGCCACTCTCCGCCTCTTCTTCCATGATTGCTTTGTTCAGGGATGTGATGCCTCTGTGATTATTGCTTCCACTCCATCCAACAAGGCTGAGAAGGATCATCCCGACAACCTCTCGCTTGCCGGAGATGGATTTGATACCGTCATTAAGGCTAAAGCCGCCCTGGATGCCATCCCTCAATGTCGAAACAGAGTATCCTGTGCCGATATTCTTGCTTTGGCCACTCGTGACGTCATCGCATTGTCCGGCGGACCGTCGTATGCGGTGGAGCTGGGAAGGTTAGACGGCCTGGTTTCAAGAGCCTCCGACGTGAACGGGAGACTGCCAGCACCGACCTTTAATCTCAATCAGCTCAATTCTCTGTTTGCTAAGAATGGGCTGACACAAGAGGACATGATCGCTCTCTCAGCGGCACACACCGTCGGATTCTCACACTGCGGGAAGTTCTCGAACCGAATTTACAGCTTTGCCCCTGGAAAGCCAGTGGACCCTTCCTTAAACAGAACATATGCAAACCAGCTACAACAGATGTGCCCGAAGAGTGTGGACCCCAGAGTGGCAATTAACATGGACCCAATCACGCCCAGAGCATTTGACAACATATACTTCAAAAATCTGCAGCAGGGAATGGGCCTATTCACCTCGGACCAGGTTTTGTTCACCGACTCCAGGTCCAGGCCCACAGTGAATTCCTGGGCCAGCAACTCCCAGGCCTTTAATAAAGCCTTTGTTGCAGCCATGACCAAGTTGGGCCGGGTCGGCGTAAAGACCGGTAGAAACGGTAACATCCGGCGTGATTGCGGAGCCTTCAATTAA 987 51.47 MGRFNLLIALSLLSLFVFPSPTLAQLRQNFYANICPNVENIVRSQVTKKFQQTFVTVPATLRLFFHDCFVQGCDASVIIASTPSNKAEKDHPDNLSLAGDGFDTVIKAKAALDAIPQCRNRVSCADILALATRDVIALSGGPSYAVELGRLDGLVSRASDVNGRLPAPTFNLNQLNSLFAKNGLTQEDMIALSAAHTVGFSHCGKFSNRIYSFAPGKPVDPSLNRTYANQLQQMCPKSVDPRVAINMDPITPRAFDNIYFKNLQQGMGLFTSDQVLFTDSRSRPTVNSWASNSQAFNKAFVAAMTKLGRVGVKTGRNGNIRRDCGAFN 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6803952 6805341 - Carg00802-RA Car03g00841 144893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00841 328 CDD secretory_peroxidase 25 327 IPR033905 GO:0004601|GO:0042744
Car03g00841 328 PANTHER - 7 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car03g00841 328 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Car03g00841 328 PANTHER PEROXIDASE 7 328 - -
Car03g00841 328 SUPERFAMILY Heme-dependent peroxidases 25 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Car03g00841 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Car03g00841 328 Gene3D Peroxidase, domain 2 166 307 - -
Car03g00841 328 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car03g00841 328 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car03g00841 328 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car03g00841 328 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car03g00841 328 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car03g00841 328 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car03g00841 328 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car03g00841 328 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car03g00841 328 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car03g00841 328 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car03g00841 328 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car03g00841 328 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car03g00841 328 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car03g00841 328 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car03g00841 328 Pfam Peroxidase 42 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car03g00841 328 ProSiteProfiles Plant heme peroxidase family profile. 25 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car03g00841 328 Gene3D - 29 328 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00841 Car-Chr3:6803952 Car15g00080 Car-Chr15:483529 4.09E-150 dispersed
Car01g01189 Car-Chr1:11033097 Car03g00841 Car-Chr3:6803952 1.26E-148 transposed
Car07g01069 Car-Chr7:6272741 Car03g00841 Car-Chr3:6803952 3.30E-176 transposed
Car20g00854 Car-Chr20:6624753 Car03g00841 Car-Chr3:6803952 0 transposed
Car03g00841 Car-Chr3:6803952 Car07g00584 Car-Chr7:2963933 5.72E-79 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00841 K00430 - csv:101206860 603.208