Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00848 ATGGAGAAGCCGGTTTGGATTTTTCTACTTTTCTGTTTCTTCTCTGGGCCGTTCATGGCTGCTGCTGTTGCTGCACAGAAGAAGACTTACGTCGTGCACATGGCCAAGTACCAAATGCCCCAGACTTTTGAGCACCACTTGCACTGGTACGACGCGTCGCTCAAATCGGTGTCCGATACGGCCGATATGATCTATGCTTACAAAACCGTCGTTCATGGGTTTTCAACCAGATTGACGGCGGAGGAAGCTCAGCGACTGGAGGCCCAACCTGGGGTTCTGGCTGTGGTGCCGGAGATGAGATATGAACTTCACACCACTCGTACTCCTCAGTTTCTTGGACTTGACAAGAATGCAGATCTGTACCCTGAATCAACCTCCACGTCGGAGGTTATCATCGGAGTTTTGGATACAGGGGTTTGGCCGGAGAGTAAGAGCTTCGACGATACTGGGCTCGGACCGGTGCCGAGTAGCTGGAAAGGAGAGTGTGAATCAGGTACCAATTTCAGTGCATCGAACTGCAACAGGAAGCTGATTGGAGCAAGATTTTTCTCCAAGGGCTACGAGGCGACTCTCGGTCCGATCGACGAATCGAAAGAATCGAGATCTCCGAGAGATGATGACGGACATGGAACCCACACCGCTACCACCGCCGCTGGTTCTGTGGTTGAAAACGCGAGCCTATTTGGCTACGCGTCCGGCACCGCCCGTGGGATGGCCGCACGTGCGAGGGTTGCCGCCTACAAGGTCTGCTGGGCCGGCGGATGTTTCAGCTCCGATATCTTAGCCGCCATTGAAAAGGCTGTGGAGGACAATGTTAATGTCCTTTCCATGTCGCTCGGCGGCGGAATATCTGACTATTACAAAGACAGCGTCGCCTCGGGATCTTTCGCCGCCATGGAGAAAGGCATCCTCATTTCTTGCTCTGCTGGGAATGCCGGCCCCAGCCCTTACAGCTTGTCAAATACGTCTCCATGGATAACAACCGTCGGCGCTGGAACATTAGATCGCGATTTCCCGGCGTACGTCAGTATCGGCGACGGCAAGAACTTCTCCGGCGTTTCGCTCTATCGAGGCAAGTCATTGCCGGGAACGTTGTTGCCTTTTATTTACGCTGCTAATGCGAGTAACTCTGCCAATGGAAATTTGTGTATGACCGGTACTTTGATCCCCGAAAAAGTGGCCGGAAAGGTCGTGTTCTGTGACCGGGGTGTAAACCCTAGGGTTCAGAAAGGGGCGGTGGTCAAAGCCGCTGGTGGAATCGGAATGGTGTTGGCCAATACCGCCGCGAATGGAGAAGAGCTGGTGGCCGACTCTCATCTTCTACCCGCCTCGGCGGTGGGTCAGAAATCCGGTGACATTATACGGAAGTATCTCATTTCAGACCCAAAGCCGACAGTGACGATCTTATTCGAGGGGACGAAATTGGGGATCGAACCGTCTCCGGTGGTGGCAGCGTTTAGCTCCCGAGGACCAAATTCTATCACTCCTCAGGTGCTGAAGCCCGACATAATCGCCCCTGGCGTCAACATCTTGGCTGGATGGTCAAAAGCAGTGGGACCGAGTGGTTTACCCATTGATGAAAGACGAGTGGATTTCAACATTATCTCTGGAACCTCCATGTCCTGCCCCCATGTGAGCGGTCTCGCCGCTCTAATCAAGGGCGCTCATCTCGACTGGAGTCCGGCGGCGATTCGATCGGCGTTGATGACAACAGCCTACACAGCTTACAAAAACGGCCAAAAGATCCAAGACATCGCCACCGGAAAACCATCCACCCCATTCGATCACGGTGCCGGACACGTCGATCCCGTATCAGCCCTCAATCCGGGTCTTGTATACGATCTAACGGTGGACGATTACCTGGACTTCCTCTGCGCACTCAACTACACTTCGTCGCAGATCAACTCCCTGGCGAGGAGAGATTACACTTGCGACTCGGGGAAGAAGTACAGTGTCAACAATCTCAACTACCCTTCATTCGCCGTCGTTTTCGACGGCGTATTGGGCGGCGGAAGCAGTGGTTCCAGTGTAGTGAAGCACACCAGAACTCTTACAAACGTCGGCTCCCCAGGAACTTACAAAGTCTCAATCTCGTCGGAGACCAAGCTGGTGAAAATCTCCGTCGAGCCGGAATCATTGAGCTTCACCAAAGCCAATGAGAAGAAGTCATACACAGTCACATTCACAACCGCGACTGGTTCCTCTGCACCGCCGAGCGCTGAAGGGTTCGGTCGAATTGAATGGACGGACGGGAAGCACGTTGTGGGAAGTCCGATTGCGTTTAGTTGGACGTAG 2295 53.59 MEKPVWIFLLFCFFSGPFMAAAVAAQKKTYVVHMAKYQMPQTFEHHLHWYDASLKSVSDTADMIYAYKTVVHGFSTRLTAEEAQRLEAQPGVLAVVPEMRYELHTTRTPQFLGLDKNADLYPESTSTSEVIIGVLDTGVWPESKSFDDTGLGPVPSSWKGECESGTNFSASNCNRKLIGARFFSKGYEATLGPIDESKESRSPRDDDGHGTHTATTAAGSVVENASLFGYASGTARGMAARARVAAYKVCWAGGCFSSDILAAIEKAVEDNVNVLSMSLGGGISDYYKDSVASGSFAAMEKGILISCSAGNAGPSPYSLSNTSPWITTVGAGTLDRDFPAYVSIGDGKNFSGVSLYRGKSLPGTLLPFIYAANASNSANGNLCMTGTLIPEKVAGKVVFCDRGVNPRVQKGAVVKAAGGIGMVLANTAANGEELVADSHLLPASAVGQKSGDIIRKYLISDPKPTVTILFEGTKLGIEPSPVVAAFSSRGPNSITPQVLKPDIIAPGVNILAGWSKAVGPSGLPIDERRVDFNIISGTSMSCPHVSGLAALIKGAHLDWSPAAIRSALMTTAYTAYKNGQKIQDIATGKPSTPFDHGAGHVDPVSALNPGLVYDLTVDDYLDFLCALNYTSSQINSLARRDYTCDSGKKYSVNNLNYPSFAVVFDGVLGGGSSGSSVVKHTRTLTNVGSPGTYKVSISSETKLVKISVEPESLSFTKANEKKSYTVTFTTATGSSAPPSAEGFGRIEWTDGKHVVGSPIAFSWT 764
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6850719 6853013 + Carg00809-RA Car03g00848 144900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00848 764 Pfam Subtilase family 128 577 IPR000209 GO:0006508|GO:0008236
Car03g00848 764 ProSiteProfiles Serine proteases, subtilase domain profile. 100 607 - -
Car03g00848 764 MobiDBLite consensus disorder prediction 193 216 - -
Car03g00848 764 Pfam PA domain 382 453 IPR003137 -
Car03g00848 764 MobiDBLite consensus disorder prediction 193 211 - -
Car03g00848 764 ProSitePatterns Serine proteases, subtilase family, serine active site. 537 547 IPR023828 -
Car03g00848 764 Pfam Peptidase inhibitor I9 29 104 IPR010259 -
Car03g00848 764 Pfam Fibronectin type-III domain 654 760 IPR041469 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00848 Car-Chr3:6850719 Car10g00692 Car-Chr10:3589429 0 dispersed
Car11g00612 Car-Chr11:3344758 Car03g00848 Car-Chr3:6850719 0 dispersed
Car20g00859 Car-Chr20:7612682 Car03g00848 Car-Chr3:6850719 4.51E-21 dispersed
Car03g00848 Car-Chr3:6850719 Car05g00130 Car-Chr5:659431 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00848 - - csv:101209691 1330.47