Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00856 ATGAATTTACACACTTTCCTCTACTCTTTCTTCTCCATTCTGTTTCTTCTTTTTGCTTTCAACCTCATCACTCGATCTCTTCGACTTCGCAAAAACTTACCGCCGAGTCCGCCATCTCTTCCGGTTATTGGCCATCTTCATCTCTTGAAAAAGCCACTCCATCGAAATTTCCAGAATCTCTCCGCCAAATATGGTCCTGTTATGTCTCTCCGCCTCGGATCTAACCTCGCTGTCGTTGTATCTTCGTCGTCAGCGGTGGAGGAGTGTTTCACTAAAAACGATGTCGTTCTTGCCAACCGTCCTCGTTTGCTAATTGGAAAATACCTCGGCTACAACTACACTACCATGATTGGGGCTTCATACGGTGATCACTGGCGGAACCTCCGCCGAATTGGCGCCATCGAGATTTTCTCTTCATCTCGAATCAACAAATTCGCCGATATCCGGAGGGATGAAGTGAAACGATTAGTGCGGAAACTGTCGCGCAATTCGATCCATCAATATTCGAAGGTAGAAATGCAATCGGCGTTGTCGGAGATGACGTTCAACATCTCGATGAGAATGGCGGCCGGGAAGAGGTATTACGGCGAGGACGTGACGGACAAGGAAGAGGCGAGGAGGTTCAGGGAGTTGATTAAGGAGATTGTGGCGGCAGGAGGAGTATCAAATCCAGGGGATTTTTTCCCCATTCTGAACTGGATCTCGAAGGGATTCGAGAGGAAATTGTTTGAATTGGGGAAGAAAGTGGATGCGTTCTTGCAGGGGCTCATCGATGACCACCGCAGGAAGAAGGAAGAAGGAAGGAACACGATGATCGATCACTTGCTCTCTCTGCAGGAATCGCAACCGGCTGTCTATGACGATCAAATAATCAAAGGATTTATACTGGTGTTACTGACTGCGGGAACCGACACATCGGCCGTGACAGTTGAATGGGCCTTGTGTCATCTATTGAACAATCCTGAAGTGTTAAAGAAGGCAAGAGACGAAATAGACACTCAAATTGGACAAGAACGCCTAGTTGAAGAACCGGACGTGTCCAAACTACCATATCTTCAAGGAATCATCTCTGAGACTCTGCGGCTGACTCCCGCAGCTCCAATGTTGTTGCCCCATTATGCAGCCAATGACTGCACAATACATGGATACGACGTGCCACGTGACACGATGCTACTAGTCAATGCATGGGCCATACATAGGGATCCAATCGAATGGGAGGATCCCTTAAGTTTCAAACCCGAGCGATACGAAAAGTCAGAAGTCGAGGTACACAAGCTGTTGTCCTTCGGAGTAGGAAGGCGAGCTTGTCCTGGGTCTGCCGTGGCGCATAGGATAATGGGTCTAACTTTGGGGGCTCTGATTCAGTGCTTCGAGTGGGAGAGAATTGGAGCAGAAGACTTGGACATGAACGAGAGGGTAGGTGCCACAATGACCAAGATGGTGCCGTTGGAGGCCATGTGCAGAGCTCGTCCCACCGTGGATAACCTTCTTGACTGA 1497 48.83 MNLHTFLYSFFSILFLLFAFNLITRSLRLRKNLPPSPPSLPVIGHLHLLKKPLHRNFQNLSAKYGPVMSLRLGSNLAVVVSSSSAVEECFTKNDVVLANRPRLLIGKYLGYNYTTMIGASYGDHWRNLRRIGAIEIFSSSRINKFADIRRDEVKRLVRKLSRNSIHQYSKVEMQSALSEMTFNISMRMAAGKRYYGEDVTDKEEARRFRELIKEIVAAGGVSNPGDFFPILNWISKGFERKLFELGKKVDAFLQGLIDDHRRKKEEGRNTMIDHLLSLQESQPAVYDDQIIKGFILVLLTAGTDTSAVTVEWALCHLLNNPEVLKKARDEIDTQIGQERLVEEPDVSKLPYLQGIISETLRLTPAAPMLLPHYAANDCTIHGYDVPRDTMLLVNAWAIHRDPIEWEDPLSFKPERYEKSEVEVHKLLSFGVGRRACPGSAVAHRIMGLTLGALIQCFEWERIGAEDLDMNERVGATMTKMVPLEAMCRARPTVDNLLD 498
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6897855 6899516 + Carg00817-RA Car03g00856 144908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00856 498 Pfam Cytochrome P450 34 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car03g00856 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00856 Car-Chr3:6897855 Car17g01280 Car-Chr17:9700159 0 dispersed
Car03g00856 Car-Chr3:6897855 Car03g00857 Car-Chr3:6900143 0 tandem
Car01g00024 Car-Chr1:127678 Car03g00856 Car-Chr3:6897855 3.77E-33 transposed
Car01g01407 Car-Chr1:12224403 Car03g00856 Car-Chr3:6897855 1.26E-77 wgd
Car02g00346 Car-Chr2:2501803 Car03g00856 Car-Chr3:6897855 2.60E-73 wgd
Car03g00856 Car-Chr3:6897855 Car09g00223 Car-Chr9:1265768 8.80E-177 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00856 K13260 - csv:101215449 823.157