Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00857 ATGGGGGCAGCCGACACGCCGCCGACAATGTGGGAACCGACTGCGAGCGGCACTAACGGATGGAGGCGTAAAGCGACGTCGTTGCATTCTCCCCGCCGACGCAGAAACTTACCGCCCGGTCCACCGTCTCTTCCCATCATCGGTCACCTCCATTATCTCAAAGTCCCCGTCCACCGAACTTTACAGAAGCTCTCTGCAAAATATGGACCCGTAATCTCTCTCTGGTTCGGATCTCGTCTCGTGGTGGTCGTCTCATCATCGGCGGTGGTGGAGGAGTGCTTCACTAAGAACGACGTCGTTCTTGCCAACCGTCCTAGGTTGCTAGTCGGCAAACATGTCGGCTACAACTACACTACGATGGTGGCGTCACCGTACGGCGATCACTGGCGGAACCTCCGCCGAATCGGCGCGATCGAGATCTTTTCGGCTTCTCGCCTGAACAAATTCGCCGGGATTCGGAGGGACGAAGTGGAACGGTTACTGAGAAAGCTATCGAAGAATTCGCTCCATGGATTCTCGAAGGTACAGATGCAATCGACGATTTCGGAACTGACGTTCAACATCTCGATGAGAATGGCGGCCGGAAAGCGATATTTCGGTGATGACGTGGCGGACGAGGACGAGGCGAGGCAGTTCAGAGAGTTGATTAAACAGATTGTATCGTTGGGAGGAGTTTCGAATCCGGGAGATTTCATTCCGATGCTGAATTGGATTCCGAATGTCTTCGAGAGGAAGGTTTCGAGACTTGCGAAGAGGACGGACGCGTTCTTGCAGGGACTGATCGACGAGCATCGGAGCAACAAGGAAGAAGAAAGGAACACGATGATCGATCACTTGCTGTCTCTGCAACAATCGGAGCCTGAATTATATGGAGATCAAATCATCAAAGGAATTATTCTGGTGTTGCTGTTAGCAGGGACGGATACATCAGCTGTAACGATGGAATGGGCCCTATCTCACTTGCTCAACAATCCGGAGATACTGAAGAAGGCTAGAGAGGAGTTGGACGCTCAAATTGGACAAGAACGACTAGTTGAAGAATCAGATGTGCCCAAGTTACCGTATCTTCAAGGAATCATCTCCGAGACTCTTAGGCTGACCCCAGCTGCTCCGTTGTTAGTGCCGCATCTCACCTCCGACGATTGCACAATAAGCAACTACAAAGTACCACGTGACACAATTGTGTTGGTTAATGCGTGGGCCATCCATAGAGATCCTAGTCAGTGGGAAGATCCCACGCGATTCAATCCCGAAAGACACCGAAAGTCAGAAGGTGATCACGCGCACAAGTTCCTTCCATTCGGAATCGGACGACGATCGTGCCCTGGGTCGGGCATGGCGCAACGAGTGGTGGGGTTGGCCCTGGCGGCGTTGATTCAATGTTACGAGTGGGAGAGGATTGGCGAAGAGAAAGTGGATATGGCGGAGGGAAGAGGTATCACCATGCCCAAGCTGACCTTGGCCCACTCTCCCTCCAGACGAGCACAGATATGGAGGTTCAGATACCTCCGCCGTCGCAGAAACTTACCGCCTACTCCGCCGTCTCTTCCCATCATCGGTCACCTCCATTATCTCAAAGTCCCTGTCCACCGAACTTTCCAGAACCTCTCTGCAAAATATGGACCAGTTTTCTCTCTCTGGTTAGGCTCTCGCCTCGTGGTGGTCGTCTCATCGTCGGAGGCCGTTGAGGAGTGCTTCACTAAGAACGACGTTGTTCTGGCCAACCGTCCTAAATTTCTAGTCGGCAAACTCGTCGCCTACAACTGTACTACGGTGGTCGGGTCGCAGTATGGCGACCACTGGCGCAACCTCCGCCGAATCGGCGCAATGGAGATATTTTCAGCGTCTCGTCTCAACCAATTCGCTGGGATCCGGATGGAGGAACTGCAACGGTTACTAAGAAAGCTATCGAGGAATTCGTTCCATGGATTCTCGAAGGTAGACATGCAATCTCTGATTTCGGAACTTACGTTCAATATCTCGATGAGAATCGCGGCTGGAAAGAGGTACTTCGGTTCCGATGTGACGGACGAGGAGGAGGCGAGGCAGTTCAGAGAAATGATTAAACAGGCTGCGTCCGTGGCAGGCGTATCGTATCCAGGAGATTTTATTCCGATTCTGAATTGGATTTCGAAGGCGTTCGAGAGGAAGCTTTTGAAACTTGGTAAGAGGATGGACACGTTCTTGCAGGGACTGATCGACCAGCATCGCAGCAACAAGGAAGAAGGACGGGACACCATGATCGATAACTTGCTGTCCCTACAAGAGTCAGACCCTACCTACTATAATGATCAAGTAATCAAGGGAATGGTTCAGGTGTTACTGTTAGCCGGAACGGAAACATTAGCTGTGACAATGGAATGGGCTCTAGCTCACTTGCTCAACAATCCGGAGATACTCAAAAAGGCTAGAGAGGAGGTGGACACTCAAATAGGAGAAGAGCGACTAGTGGATGAATCAGACGCGTCTAAGTTACCATATGTTCAAGCAGTGATCTTAGAGACTCTTCGACTAAACCCAGCTTCCCCATTGCTAGTGCCGCATCTTACCTCCGACGATTGCACCATAAGCAATTACAAAATACCTCGAGACACAATTGTGTTGGTTAATGCATGGGCCCTCCATAGAGATCCTAATCAATGGGAAGACCCCACGCGGTTCAATCCAGACAGACACCTGGAGTCTGAAGGCGATATGTTGTACAAGTTGGTTCCATTTGGAGTTGGACGACGATCGTGTCCTGGAGCGGTTATGGCGCAACGAACAATGGGGTTGACGCTGGGTGCGCTGATTCAGTGCTACGAGTGGGAGAGGGTTCGCGAAGAGATAGTGGATATGAGGGAGGGGAGAGGCGTCACCATGCCCAAGGCGGTGCCTCTTGAAGCTATGTGCAAAGCCCCACCCTTCCTGCTCGGTCCCGAAGCCAACGTAAACGCTACGCCGCCGTCTCCGCTCGATCGGCTACCGGAATCTTCTGGCGACGATGCTGCTATTTCCGAGCTGGAAATAGCAGAGCCGTTGTTGGTACGTTGGTGCTCTATCGTTGAACCGGATCGGAGCGGTCTGCAATCCACGAGAGGAAGAAACCGTGTGGCGGCCATTAGCACCATGATTAGAAGTAAAGAGGAGTTCTTCATCTTGGGCATCGCCGGAGAGTTTAGATTCTGCGATAGCATAGAGAATGGAGCAGGAGAAAGAAGCAAAAGGATTGGTTTGGCATCTCTCTACTTGCATTGA 3237 51.71 MGAADTPPTMWEPTASGTNGWRRKATSLHSPRRRRNLPPGPPSLPIIGHLHYLKVPVHRTLQKLSAKYGPVISLWFGSRLVVVVSSSAVVEECFTKNDVVLANRPRLLVGKHVGYNYTTMVASPYGDHWRNLRRIGAIEIFSASRLNKFAGIRRDEVERLLRKLSKNSLHGFSKVQMQSTISELTFNISMRMAAGKRYFGDDVADEDEARQFRELIKQIVSLGGVSNPGDFIPMLNWIPNVFERKVSRLAKRTDAFLQGLIDEHRSNKEEERNTMIDHLLSLQQSEPELYGDQIIKGIILVLLLAGTDTSAVTMEWALSHLLNNPEILKKAREELDAQIGQERLVEESDVPKLPYLQGIISETLRLTPAAPLLVPHLTSDDCTISNYKVPRDTIVLVNAWAIHRDPSQWEDPTRFNPERHRKSEGDHAHKFLPFGIGRRSCPGSGMAQRVVGLALAALIQCYEWERIGEEKVDMAEGRGITMPKLTLAHSPSRRAQIWRFRYLRRRRNLPPTPPSLPIIGHLHYLKVPVHRTFQNLSAKYGPVFSLWLGSRLVVVVSSSEAVEECFTKNDVVLANRPKFLVGKLVAYNCTTVVGSQYGDHWRNLRRIGAMEIFSASRLNQFAGIRMEELQRLLRKLSRNSFHGFSKVDMQSLISELTFNISMRIAAGKRYFGSDVTDEEEARQFREMIKQAASVAGVSYPGDFIPILNWISKAFERKLLKLGKRMDTFLQGLIDQHRSNKEEGRDTMIDNLLSLQESDPTYYNDQVIKGMVQVLLLAGTETLAVTMEWALAHLLNNPEILKKAREEVDTQIGEERLVDESDASKLPYVQAVILETLRLNPASPLLVPHLTSDDCTISNYKIPRDTIVLVNAWALHRDPNQWEDPTRFNPDRHLESEGDMLYKLVPFGVGRRSCPGAVMAQRTMGLTLGALIQCYEWERVREEIVDMREGRGVTMPKAVPLEAMCKAPPFLLGPEANVNATPPSPLDRLPESSGDDAAISELEIAEPLLVRWCSIVEPDRSGLQSTRGRNRVAAISTMIRSKEEFFILGIAGEFRFCDSIENGAGERSKRIGLASLYLH 1078
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6900143 6906907 + Carg00818-RA Car03g00857 144909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00857 1078 Pfam Cytochrome P450 38 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car03g00857 1078 Pfam Cytochrome P450 510 955 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car03g00857 1078 MobiDBLite consensus disorder prediction 1 41 - -
Car03g00857 1078 MobiDBLite consensus disorder prediction 11 25 - -
Car03g00857 1078 Coils Coil 619 639 - -
Car03g00857 1078 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 906 915 IPR017972 GO:0005506|GO:0016705
Car03g00857 1078 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00857 Car-Chr3:6900143 Car17g01280 Car-Chr17:9700159 0 dispersed
Car14g00920 Car-Chr14:5516361 Car03g00857 Car-Chr3:6900143 4.18E-78 dispersed
Car20g00834 Car-Chr20:5655972 Car03g00857 Car-Chr3:6900143 1.15E-37 dispersed
Car03g00856 Car-Chr3:6897855 Car03g00857 Car-Chr3:6900143 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00857 K13260 - csv:101215922 1419.45