Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00870 ATGATTCCCAACCCACCCACATTCCTCACAACCTTTCCACTTCTCTGTTGTGTTGTGCTGTGTTCTCTCTCCGCCTTTTCCGCCTCAGGATTTGCCTTTCAAATTCCGCCGCCTGCGCTTGTCCCACCGGAAGAATTGCGGTTGCCTTCCGACGCTGTTTCTCTTCTGTCCTTCAAGTCCAAAGCCGACTTGGACAACAAGCTTCTATACACTCTCAATGAGCGCTTTGATTACTGTCAATGGCAGGGCGTGAAGTGCGTCCAGGGTCGTGTTGTTCGTTTGGTTCTTCAATCGTTTGGGCTCCGAGGGATTTTGGCTCCAAACACAGTGTCTAAGCTCGACCAGCTTCGGTTCCTCAGCCTGCATAATAACTCGCTCGAAGGACCCATTCCTGACCTATCCGGACTCTTCAATCTCAAATCTCTGTTCCTTGGCCGAAACTCTTTCGTTGGGTCTTTTCCGCCGTCGATTCTCACTCTTCACCGGCTTCAGACTCTCGACCTTTCCTATAACAACTTCACGGGTCCGCTTCCGGTGAGGCTTTCCTCCTTGGACCGGCTCATTTCTCTCCGCCTTGAATGGAATGGTTTCAATGGAAGTATTCCTCCATTAAACCAGTCCTTCCTTGAGGTCTTCAATGTCGCGGGGAATAACCTGACCGGGCAAATTCCAGTTACCCCCACACTGTCGCGTTTCAACACGTCGTCGTTTTTCTGGAACCCAGATCTCTGCGGTGAGATCGTCAACAAGGCATGCCATTCACGCGCTCCATTCTTTGAAGCTTCCAATGCTACTCCACCATCTCTCCCTTCCGTCCAAAGCGCACAGTCACAGGACATACTTCTCTCTCCGGTCTCTCATGTTAAGCACAAGGAAACCGGTCTGATTGTGGGACTTTCAGTCGGCGCCGCAGTTTTAATAGCAGGTCTTTTATGTTTCTATGTAGCTGCCAGAACCCAAAAAAAAACCGCGTCGAAGCCGGAAATTCCGCCTTTCGAAACCGACACTGCGTTTTCCACTGCTTCCGCAATCAACGGCCGAGGCGACGGAAAGGGCGAGCTTCAAGCCAAAATGAAAGAAATTGAAGATATACCTAAAGTCCAGAAGAGTGGTAGTCTTATATTTTGTGAAGGGGAGGCAGAGTTGTTCAGCTTAGAGCAGTTAATGAGGGCTTCGGCCGAGCTGCTCGGTAGAGGCACAATGGGAACTACATACAAAGCAGTACTCTGCAACCAGCTAATCGTAACGGTGAAGCGTCTTGATGCTACTAAGACCGCCGCGACGAGCAGCGAAGTTTTCGACCGGCATTTGGAAGCAGTAGGTGCGCTTCGTCACCCCAATTTGGTTCCAGTTAGGGCCTATTTCCAAGCCAGGGGAGAGAGATTAGTGGTCTACGATTATCAACCTAATGGCAGTCTTTACAACCTCATTCACGGTTCAAGATCAGCAAGGGCTAAGCCTCTGCACTGGACATCATGCTTAAAGATTGCAGAAGATTTAGCTCAGGGAATTGCTTATATACATCAAGCTTCTAAGTTAATCCATGGCAACTTAAAGTCTACTAATGTCCTCCTTGGAGCAGAGTTTGAGGCCTGTCTCACAGACTATGGGCTTTCTGCTCTGGCTGAGTGTTGTGAAGATCCTGATGGTTCACGCTACCAAGCCCCTGAAACTCGCAAGTCCAGCCGGAATGCCACCCACAAGAGCGATGTGTATGCCTTCGGCGTGCTCTTGCTGGAGCTTTTGACAGGAAGACATCCAGCACAGCACCCATTTCTTGAGCCAACTGATATGTTAGAATGGGTAAGGATAGTTAGGGAGGATGATGGTGGGGATAGTAACCAACTTGGAATGCTTACTGAGGTGGCTAGCATCTGTAGTACTACATCCCCTGAACAGAGGCCGGCCATGTGGCAAGTTTTGAAAATGATTCTAGAAATCAAGGAGAGTGTCATGACAGAGGACAGTGAATCTAGTGGCTTTTAA 1986 49.35 MIPNPPTFLTTFPLLCCVVLCSLSAFSASGFAFQIPPPALVPPEELRLPSDAVSLLSFKSKADLDNKLLYTLNERFDYCQWQGVKCVQGRVVRLVLQSFGLRGILAPNTVSKLDQLRFLSLHNNSLEGPIPDLSGLFNLKSLFLGRNSFVGSFPPSILTLHRLQTLDLSYNNFTGPLPVRLSSLDRLISLRLEWNGFNGSIPPLNQSFLEVFNVAGNNLTGQIPVTPTLSRFNTSSFFWNPDLCGEIVNKACHSRAPFFEASNATPPSLPSVQSAQSQDILLSPVSHVKHKETGLIVGLSVGAAVLIAGLLCFYVAARTQKKTASKPEIPPFETDTAFSTASAINGRGDGKGELQAKMKEIEDIPKVQKSGSLIFCEGEAELFSLEQLMRASAELLGRGTMGTTYKAVLCNQLIVTVKRLDATKTAATSSEVFDRHLEAVGALRHPNLVPVRAYFQARGERLVVYDYQPNGSLYNLIHGSRSARAKPLHWTSCLKIAEDLAQGIAYIHQASKLIHGNLKSTNVLLGAEFEACLTDYGLSALAECCEDPDGSRYQAPETRKSSRNATHKSDVYAFGVLLLELLTGRHPAQHPFLEPTDMLEWVRIVREDDGGDSNQLGMLTEVASICSTTSPEQRPAMWQVLKMILEIKESVMTEDSESSGF 661
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6958315 6961011 + Carg00831-RA Car03g00870 144922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00870 661 Pfam Protein kinase domain 393 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00870 661 ProSiteProfiles Protein kinase domain profile. 390 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00870 Car-Chr3:6958315 Car04g01549 Car-Chr4:8998814 4.61E-117 dispersed
Car04g00041 Car-Chr4:225321 Car03g00870 Car-Chr3:6958315 2.29E-162 transposed
Car04g00922 Car-Chr4:5282794 Car03g00870 Car-Chr3:6958315 1.42E-156 transposed
Car03g00870 Car-Chr3:6958315 Car07g00687 Car-Chr7:3517308 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88732 PF00069 Pkinase 4.50E-30 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00870 - - bhj:120074099 1139.02