Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car03g00891 | ATGAAGGATAACTCCTCCAAACTTATTGTTTTCTTGCTTATAAGCTTCGTTTTCTTGAATCACCTCCTTGTGTCCTCACAACTTGATTATAGATTCTATGATGACTCGTGTCCCAACCTAACAAGAATTGTCAGATATGGCGTCTGGATGGCAGTTTCTAATGATACTAGGATGGCTGCTTCTCTCTTACGCCTTCATTTTCATGATTGCTTTGTCAACGGCTGTGATGGATCATTGTTGCTTGATGACACTAGCTCATTTAAAGGGGAGAAAAATGCATTGCCAAATATGAACTCAGTTCGAGGCTATGAGGTCATTGATGATATAAAGGCTGTTTTAGAGAGAGTCTGCCCATCTGTCGTGTCATGCACTGATATAGTGACTCTAGCAGCTAGAGAGGCTGTCTACCTTGCTGGAGGACCCTTTTGGCCCATTCCACTCGGTCGGCGAGATGGCACGACAGCAAGCGAGAGTGAAGCCAATCAGCTGCCATCACCGTTGGAGCCATTGGAGAATATCATTGCAAAATTCACTAAAAAAGGGCTTGATGTAAAGGATGTTGTCGTGCTCTCAGGTGCACACACTTTCGGGTTAGCTCGGTGCATGATGTTCAAGCATAGACTGTTCAACTTCGATGGCTCTGGCAATCCTGACCCAGAACTAGATGTCATGCTGCGACAGAATTTACAGAGCGTCTGTCCCAATCATGATGACTCCAACGACAAACTGGCCCCCTTGGACACGTACACGATCAGCAGGTTTGACAATGTGTATTACAGAAACTTGGTGAACAAGTTGGGACTTTTGCAGTCAGACCAAGCTCTGATGAAACACAATACAACTGCTCCGTTGGTGGTGAGCTACAGCAGGTACCCATACCTGTTTAACAGGGACTTTGGAGCATCAATGGTGAAGCTGGGCAATACTGGAGTCCTTACAGGCCAAAATGGGGAAATTAGGAAGAATTGCAGGGTGGTGAACTAG | 984 | 45.53 | MKDNSSKLIVFLLISFVFLNHLLVSSQLDYRFYDDSCPNLTRIVRYGVWMAVSNDTRMAASLLRLHFHDCFVNGCDGSLLLDDTSSFKGEKNALPNMNSVRGYEVIDDIKAVLERVCPSVVSCTDIVTLAAREAVYLAGGPFWPIPLGRRDGTTASESEANQLPSPLEPLENIIAKFTKKGLDVKDVVVLSGAHTFGLARCMMFKHRLFNFDGSGNPDPELDVMLRQNLQSVCPNHDDSNDKLAPLDTYTISRFDNVYYRNLVNKLGLLQSDQALMKHNTTAPLVVSYSRYPYLFNRDFGASMVKLGNTGVLTGQNGEIRKNCRVVN | 327 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 7086082 | 7087530 | - | Carg00852-RA | Car03g00891 | 144943 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car03g00891 | 327 | ProSiteProfiles | Plant heme peroxidase family profile. | 27 | 327 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Car03g00891 | 327 | CDD | secretory_peroxidase | 27 | 326 | IPR033905 | GO:0004601|GO:0042744 | |
Car03g00891 | 327 | Pfam | Peroxidase | 49 | 290 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Car03g00891 | 327 | ProSitePatterns | Peroxidases active site signature. | 59 | 70 | IPR019794 | GO:0004601 | |
Car03g00891 | 327 | Gene3D | - | 31 | 327 | - | - | |
Car03g00891 | 327 | PANTHER | PEROXIDASE 72-RELATED | 12 | 326 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Car03g00891 | 327 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 186 | 196 | IPR019793 | - | |
Car03g00891 | 327 | SUPERFAMILY | Heme-dependent peroxidases | 27 | 327 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Car03g00891 | 327 | Gene3D | Peroxidase, domain 2 | 164 | 306 | - | - | |
Car03g00891 | 327 | PRINTS | Haem peroxidase superfamily signature | 59 | 73 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Car03g00891 | 327 | PRINTS | Haem peroxidase superfamily signature | 121 | 138 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Car03g00891 | 327 | PRINTS | Haem peroxidase superfamily signature | 139 | 151 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Car03g00891 | 327 | PRINTS | Haem peroxidase superfamily signature | 186 | 201 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Car03g00891 | 327 | PRINTS | Haem peroxidase superfamily signature | 247 | 262 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Car03g00891 | 327 | PANTHER | PEROXIDASE | 12 | 326 | - | - | |
Car03g00891 | 327 | PRINTS | Plant peroxidase signature | 37 | 56 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Car03g00891 | 327 | PRINTS | Plant peroxidase signature | 61 | 81 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Car03g00891 | 327 | PRINTS | Plant peroxidase signature | 101 | 114 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Car03g00891 | 327 | PRINTS | Plant peroxidase signature | 120 | 130 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Car03g00891 | 327 | PRINTS | Plant peroxidase signature | 139 | 154 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Car03g00891 | 327 | PRINTS | Plant peroxidase signature | 185 | 197 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Car03g00891 | 327 | PRINTS | Plant peroxidase signature | 245 | 260 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Car03g00891 | 327 | PRINTS | Plant peroxidase signature | 261 | 278 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Car03g00891 | 327 | PRINTS | Plant peroxidase signature | 301 | 314 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car02g00297 | Car-Chr2:1998684 | Car03g00891 | Car-Chr3:7086082 | 8.47E-128 | dispersed | |
Car02g00495 | Car-Chr2:3865309 | Car03g00891 | Car-Chr3:7086082 | 3.14E-86 | dispersed | |
Car03g00891 | Car-Chr3:7086082 | Car16g00669 | Car-Chr16:4236763 | 2.72E-100 | dispersed | |
Car18g00255 | Car-Chr18:1480241 | Car03g00891 | Car-Chr3:7086082 | 2.08E-60 | dispersed | |
Car18g00627 | Car-Chr18:7477508 | Car03g00891 | Car-Chr3:7086082 | 2.68E-26 | dispersed | |
Car19g00328 | Car-Chr19:5167788 | Car03g00891 | Car-Chr3:7086082 | 1.33E-84 | dispersed | |
Car08g00173 | Car-Chr8:1048815 | Car03g00891 | Car-Chr3:7086082 | 1.50E-59 | transposed | |
Car10g00511 | Car-Chr10:2562428 | Car03g00891 | Car-Chr3:7086082 | 1.50E-88 | transposed | |
Car19g00225 | Car-Chr19:2224769 | Car03g00891 | Car-Chr3:7086082 | 8.12E-73 | transposed | |
Car02g00312 | Car-Chr2:2126533 | Car03g00891 | Car-Chr3:7086082 | 1.36E-130 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car03g00891 | K00430 | - | csv:101218459 | 589.341 |