Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00891 ATGAAGGATAACTCCTCCAAACTTATTGTTTTCTTGCTTATAAGCTTCGTTTTCTTGAATCACCTCCTTGTGTCCTCACAACTTGATTATAGATTCTATGATGACTCGTGTCCCAACCTAACAAGAATTGTCAGATATGGCGTCTGGATGGCAGTTTCTAATGATACTAGGATGGCTGCTTCTCTCTTACGCCTTCATTTTCATGATTGCTTTGTCAACGGCTGTGATGGATCATTGTTGCTTGATGACACTAGCTCATTTAAAGGGGAGAAAAATGCATTGCCAAATATGAACTCAGTTCGAGGCTATGAGGTCATTGATGATATAAAGGCTGTTTTAGAGAGAGTCTGCCCATCTGTCGTGTCATGCACTGATATAGTGACTCTAGCAGCTAGAGAGGCTGTCTACCTTGCTGGAGGACCCTTTTGGCCCATTCCACTCGGTCGGCGAGATGGCACGACAGCAAGCGAGAGTGAAGCCAATCAGCTGCCATCACCGTTGGAGCCATTGGAGAATATCATTGCAAAATTCACTAAAAAAGGGCTTGATGTAAAGGATGTTGTCGTGCTCTCAGGTGCACACACTTTCGGGTTAGCTCGGTGCATGATGTTCAAGCATAGACTGTTCAACTTCGATGGCTCTGGCAATCCTGACCCAGAACTAGATGTCATGCTGCGACAGAATTTACAGAGCGTCTGTCCCAATCATGATGACTCCAACGACAAACTGGCCCCCTTGGACACGTACACGATCAGCAGGTTTGACAATGTGTATTACAGAAACTTGGTGAACAAGTTGGGACTTTTGCAGTCAGACCAAGCTCTGATGAAACACAATACAACTGCTCCGTTGGTGGTGAGCTACAGCAGGTACCCATACCTGTTTAACAGGGACTTTGGAGCATCAATGGTGAAGCTGGGCAATACTGGAGTCCTTACAGGCCAAAATGGGGAAATTAGGAAGAATTGCAGGGTGGTGAACTAG 984 45.53 MKDNSSKLIVFLLISFVFLNHLLVSSQLDYRFYDDSCPNLTRIVRYGVWMAVSNDTRMAASLLRLHFHDCFVNGCDGSLLLDDTSSFKGEKNALPNMNSVRGYEVIDDIKAVLERVCPSVVSCTDIVTLAAREAVYLAGGPFWPIPLGRRDGTTASESEANQLPSPLEPLENIIAKFTKKGLDVKDVVVLSGAHTFGLARCMMFKHRLFNFDGSGNPDPELDVMLRQNLQSVCPNHDDSNDKLAPLDTYTISRFDNVYYRNLVNKLGLLQSDQALMKHNTTAPLVVSYSRYPYLFNRDFGASMVKLGNTGVLTGQNGEIRKNCRVVN 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7086082 7087530 - Carg00852-RA Car03g00891 144943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00891 327 ProSiteProfiles Plant heme peroxidase family profile. 27 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car03g00891 327 CDD secretory_peroxidase 27 326 IPR033905 GO:0004601|GO:0042744
Car03g00891 327 Pfam Peroxidase 49 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car03g00891 327 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Car03g00891 327 Gene3D - 31 327 - -
Car03g00891 327 PANTHER PEROXIDASE 72-RELATED 12 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car03g00891 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Car03g00891 327 SUPERFAMILY Heme-dependent peroxidases 27 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Car03g00891 327 Gene3D Peroxidase, domain 2 164 306 - -
Car03g00891 327 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car03g00891 327 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car03g00891 327 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car03g00891 327 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car03g00891 327 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car03g00891 327 PANTHER PEROXIDASE 12 326 - -
Car03g00891 327 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car03g00891 327 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car03g00891 327 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car03g00891 327 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car03g00891 327 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car03g00891 327 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car03g00891 327 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car03g00891 327 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car03g00891 327 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00297 Car-Chr2:1998684 Car03g00891 Car-Chr3:7086082 8.47E-128 dispersed
Car02g00495 Car-Chr2:3865309 Car03g00891 Car-Chr3:7086082 3.14E-86 dispersed
Car03g00891 Car-Chr3:7086082 Car16g00669 Car-Chr16:4236763 2.72E-100 dispersed
Car18g00255 Car-Chr18:1480241 Car03g00891 Car-Chr3:7086082 2.08E-60 dispersed
Car18g00627 Car-Chr18:7477508 Car03g00891 Car-Chr3:7086082 2.68E-26 dispersed
Car19g00328 Car-Chr19:5167788 Car03g00891 Car-Chr3:7086082 1.33E-84 dispersed
Car08g00173 Car-Chr8:1048815 Car03g00891 Car-Chr3:7086082 1.50E-59 transposed
Car10g00511 Car-Chr10:2562428 Car03g00891 Car-Chr3:7086082 1.50E-88 transposed
Car19g00225 Car-Chr19:2224769 Car03g00891 Car-Chr3:7086082 8.12E-73 transposed
Car02g00312 Car-Chr2:2126533 Car03g00891 Car-Chr3:7086082 1.36E-130 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00891 K00430 - csv:101218459 589.341