Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00893 ATGGGTTGGTTGCGCAATATCTCCTTTACTACTTCCTCCATGGTGAGAATTCCGGCCACTGCCACCGGTGACCATTCCCCGACCAGAAAGGCTACTACCAGAGACTCCCACAATCATAATTATCGGGGAGTTGTTTGGCGTTTTGGCGCCTCTAAACATTCCCGCCATAGGAAGCTTCGGAACTTAAGCGGACGTGAGCGTGCCGCTACTTCTTTGGCTAAATGGTCCGATACTACGCCCGAACCCGACTCATTGTCAAGACTGTCGAGTACTTCTGATGAACATGCCGTGCCCTTGCCTCTCCCGGAGGTTCCCCCGATATTTCAGCGTCGTGAAGGGATCTCGAATTCGAATTCTGCTTGTGGAGACGGGGATTGTCCTCTTCCGTCGCCCAAGGATTGGCATGGCCGAGGCGGGGACGACCGTGATGTAGATAGATGTAGAACTGCACCTCCTCTTAAGACTGGAGGCGGGGATTCCATTGGTACTCCGATTAAAAGTATATCTGATTCTGGGGAGAGGCAGAAGAAAGAAGATCAGATTGGGACAAGGTCGTCTGGGAGGGTGAATCAATATGCCAGACGCTTTCCTGAAGCATCTCAGAATAAATTTTGGATTGACGTTCCCTGTAGGAGTGCTCCTACTAGTCCTTTTGCAAGTCCTACACTTAGTCCCCAAAGAAATAGTTCCAGCAACCTTTCAAACTCCCGTCATGTGGCTCCGTTAGAATATCAAGGCTGGTCTGCACCTGAGCTACCATCCTCAGCAATGATGCGGGGGGTTCCTCCTGCATTCTTTGATGGCTCCACTCTTAGCTCTGAGAGTTCTCCCATGCATAGCCCAACAGTTAGAAATCCCCACCAAGATCCCAGAAGTCCAACAGGAGCTTCATCTCCATTGCAAACCAAGATTTCCCTTGAAACACATGCTCAGCGTCGTGAAGGTTCTGGTCCTGTCAGTGTCCACCCATTACCTCTTCCACCTGGAGTACCAATACCTTCATCGTCAATCTCAATGACTTCACCGTCAACCATAATGCCTTCACCATCAACCCCAACGCCTTCACCATCAACCCCAACGCCTCTACCATCAACCCCAATTACAGAAGCTAACACTAAAGCTGAGCCAATCTCAATGAAAAATCAATGGCGGAAAGGAAAACTTATTGGCCGGGGCACATTTGGAAGTGTTTATGTTGCAAGCAACAGAGAAAATGGAGCTTTATGTGCAATGAAGGAAGTTGAATTATTTCACGATGATCCGAAGTCAGCTGAATGTATAAAGCAATTAGAACAGGAAATCAAACTTCTGAGCCAGCTAAAGCATCCAAATATTGTCCAGTACTATGGTAGTGATTTTGTTGAAGATCGATTATATATTTACCTGGAGTATGTTCATCCTGGTTCAATTAATAAATATGTTCGTGAACATTGTGGAGCCATGACAGAATCTGTTGTTCGAAGTTTTACTCGTCACATCCTCTCAGGGTTGGCCTACTTGCACAGCACAAAGACTATACATCGGGACATTAAAGGTGCTAATTTGCTTGTAGACTCTTGTGGGGTTGTCAAGCTTGCTGACTTTGGAATGGCTAAACATCTTACAGGACAAGTTGCTGATCTCTCTTTAAAGGGAAGTCCATACTGGATGGCTCCTGAGCTCCTTCTGTCTGTGAAGCAGAAGGATAACAACTCTGATCTTGCCTTAGCTGTTGATATTTGGAGCCTTGGTTGCACTATTATAGAAATGTTCACTGGCAAGCCACCTTGGAGCGACTATGAAGGGGCTGCAGCTATGTTTAAGGTAATGAGAGACACCCCAACAATACCTGAATCATTATCATATGAAGCCAGAGATTTCTTAAAATGCTGCTTTCAGAGAAATCCTGCAGAGAGGTCGACTGCTGCCATGCTGCTTGAACATCCATTTATAAAAAACTTGCAACATCCAGATGCTCCATCTTGCTATCAGGCCATCGCTAGATCGAGTTTGATGGACAAATGCTACAGCCCAAGTAAACAATATTCGAGTAAACTTGATCAGTCTTCCATGCTTCCAAGCTCACAAAATTCCAAGGGAATGTTAGCGGCCGAGAGGCAAGAGTTGCCTTTTCCCTTGCTCTCCACTTCTCATTTGTAA 2139 46.24 MGWLRNISFTTSSMVRIPATATGDHSPTRKATTRDSHNHNYRGVVWRFGASKHSRHRKLRNLSGRERAATSLAKWSDTTPEPDSLSRLSSTSDEHAVPLPLPEVPPIFQRREGISNSNSACGDGDCPLPSPKDWHGRGGDDRDVDRCRTAPPLKTGGGDSIGTPIKSISDSGERQKKEDQIGTRSSGRVNQYARRFPEASQNKFWIDVPCRSAPTSPFASPTLSPQRNSSSNLSNSRHVAPLEYQGWSAPELPSSAMMRGVPPAFFDGSTLSSESSPMHSPTVRNPHQDPRSPTGASSPLQTKISLETHAQRREGSGPVSVHPLPLPPGVPIPSSSISMTSPSTIMPSPSTPTPSPSTPTPLPSTPITEANTKAEPISMKNQWRKGKLIGRGTFGSVYVASNRENGALCAMKEVELFHDDPKSAECIKQLEQEIKLLSQLKHPNIVQYYGSDFVEDRLYIYLEYVHPGSINKYVREHCGAMTESVVRSFTRHILSGLAYLHSTKTIHRDIKGANLLVDSCGVVKLADFGMAKHLTGQVADLSLKGSPYWMAPELLLSVKQKDNNSDLALAVDIWSLGCTIIEMFTGKPPWSDYEGAAAMFKVMRDTPTIPESLSYEARDFLKCCFQRNPAERSTAAMLLEHPFIKNLQHPDAPSCYQAIARSSLMDKCYSPSKQYSSKLDQSSMLPSSQNSKGMLAAERQELPFPLLSTSHL 712
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7090550 7095966 - Carg00854-RA Car03g00893 144945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00893 712 Pfam Protein kinase domain 384 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00893 712 ProSitePatterns Protein kinases ATP-binding region signature. 389 412 IPR017441 GO:0005524
Car03g00893 712 MobiDBLite consensus disorder prediction 72 93 - -
Car03g00893 712 ProSiteProfiles Protein kinase domain profile. 383 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00893 712 MobiDBLite consensus disorder prediction 134 149 - -
Car03g00893 712 MobiDBLite consensus disorder prediction 57 190 - -
Car03g00893 712 MobiDBLite consensus disorder prediction 347 363 - -
Car03g00893 712 MobiDBLite consensus disorder prediction 268 306 - -
Car03g00893 712 MobiDBLite consensus disorder prediction 263 369 - -
Car03g00893 712 MobiDBLite consensus disorder prediction 216 236 - -
Car03g00893 712 MobiDBLite consensus disorder prediction 19 38 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00893 Car-Chr3:7090550 Car16g00103 Car-Chr16:632279 1.05E-113 dispersed
Car12g00485 Car-Chr12:3045166 Car03g00893 Car-Chr3:7090550 5.16E-155 wgd
Car03g00893 Car-Chr3:7090550 Car05g00172 Car-Chr5:890545 5.82E-167 wgd
Car03g00893 Car-Chr3:7090550 Car07g00707 Car-Chr7:3640237 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88734 PF00069 Pkinase 2.80E-67 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00893 - - cmax:111478157 1274.61