Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00914 ATGACTTTGCACCGGAACTTATTGATCGTCATAATCGCAATTTTCTCGGCTTCTTTAACAATCGCCGGGGAGTTAACGTCCTGCGAAACTGGAAATTCGGCTGAATTTGTACAACATCCGTTTGGATTCTCAAACTCGAGCCCGATCAAATTGAATTGCAGCAAAAATGGCGAGGTTCAAATCGGAAGATTCCAGGTCCAGAACATTACTGAAAGGAGCATCCTCATCAAACTTCCTGAAGAGTGCAATATCTCTATCAATTCAATGTCAGAACTGTTCGGCCAAAACTACAAGCCCACTCTCCGCAATAGTCTCCTCTTGAATTGTACTGAACAACCTATTTCATGCGGAGTAATGGCCAATTTCAGCCAGAATCAGAAGAAGAACTGCGGCTTTAAGAGTAATAATTTCACCTGCTTCACTAAGACCGAGCGGAAGGGATTTCTGCCCTCTTTAAATAAGTGCCAGTCCCTTTTGTCCTCTGTATTCGTTAATTTTACGTCACCATCGACCTCTTCGTTCGAGCTCCAGTTTGGGGTCATTGAGTTAGAGTGGTGGCTCTCGCCCGTGCCTTCTATGCGATGCTCGAAAAATGCCAATCGCAAGAACATTACCAGCTTTGCGGATCTCCTAGGATTTCGTTGCCAGTGCATAGAAGGGTTTGAAGGAAATGCTTACGACGACGTCGGCCACGGCTGCCGGAAAGCTTCTCACAAATGCAATCTTTCTACGTACATTACTGGCCACTGTGGCAGAAGCAAAGTCGCTGCTCTAATTGGAGTTATAATCTCAGGTGTCATTGTTGGGGCCTTTATAATGGCCGTCCTGATCCTTATCTGTTACTGCATCCGACGCCGCTCATTGTGTTTGAAAGGTCAGATGAGTGCAAAGCGGCTTCTAAGTGAGGCTGCCGGAAATTCGAGTGTTACTTTATATCCCTACAAAGAAATAGAAAGAGCCACTAGTGGTTTCTCTGAGAAACAAAGGCTGGGAACTGGAGCCTTTGGTACAGTCTATGCAGGAAGGCTTCATGAGGATGAGTGGGTTGCTGTAAAAAGGATCAAATATAGAGACCACAATAGCATTGATCAGGTCATGAATGAGATAAAACTGCTCTCCTCAGTTAGCCACCCGAATCTAGTTCGCTTGCTTGGCTGTTGCATCGAGGAAGGCCAACAGATCCTTGTTTATGAGTTTATGCCTAATGGAACTCTCTCTCAACATCTTCAGAGAGAGCGTGGAAATGGCCTTCCATGGACGACACGACTCACCATTGCAGCCGAAACTTCTCGTGCAATAGCATACCTCCATTCTTCTGTGCATCCACCAATATATCACAGAGACATCAAATCAAGCAATATACTTCTGGATCATAGCTTCAAATCAAAAGTGGCAGATTTTGGTCTTTCTAGACTTGGTATGACAGAAATATCACATGTCTCAACAGCTCCACAAGGGACCCCAGGTTATGTTGATCCGCAATACCATCAAAATTTTTATCTTTCAGATAAAAGCGACGTATATAGTTTTGGAGTAGTCCTAATAGAGATAATAACCGCATTGAAAGTGGTTGATTTCACTCGTCCCCCGAGTGAAGTAAACTTAGCCGCACTTGCCATCGATAGGATTGGGAGGGGTTGTGTGGATGAACTAATTGATCCTTTCCTCGAGCCAAATAGAGATGCTTGGACCCTCTACTCTGTTCACAAGGTGGTTGAGCTTGCATTCAGATGCCTCGCATTTCATAGCGACATGAGGCCTTCGATGACGGAAGTAGCAGAGGAACTGGAAAGCATCAGACGCAGCGGGTGGACATCAATGGAGGAGAATTTTTGTGCAGCATCATCAACAGGATCGGCTTGCTCATCTCCTCGAAGCGTAAGCGAGAGATCCATCAGTAGCATTACAATAAAGAAGGCCGGGCTACTTGCAGGACTGGGGAGCCAGAGATTGATAATCCCACCGGAGAACAACCATCAGAAGGACTATCTGCCTTCTGTAGAGGAGGTTATGGATAGTTCCCCAGTTTCCATACAGGATCCTTGGTTAAGTGAACAAAGCTCACCTTCAACAAATAGTTTATTGGGTAATGTGGCACGGTGA 2103 45.27 MTLHRNLLIVIIAIFSASLTIAGELTSCETGNSAEFVQHPFGFSNSSPIKLNCSKNGEVQIGRFQVQNITERSILIKLPEECNISINSMSELFGQNYKPTLRNSLLLNCTEQPISCGVMANFSQNQKKNCGFKSNNFTCFTKTERKGFLPSLNKCQSLLSSVFVNFTSPSTSSFELQFGVIELEWWLSPVPSMRCSKNANRKNITSFADLLGFRCQCIEGFEGNAYDDVGHGCRKASHKCNLSTYITGHCGRSKVAALIGVIISGVIVGAFIMAVLILICYCIRRRSLCLKGQMSAKRLLSEAAGNSSVTLYPYKEIERATSGFSEKQRLGTGAFGTVYAGRLHEDEWVAVKRIKYRDHNSIDQVMNEIKLLSSVSHPNLVRLLGCCIEEGQQILVYEFMPNGTLSQHLQRERGNGLPWTTRLTIAAETSRAIAYLHSSVHPPIYHRDIKSSNILLDHSFKSKVADFGLSRLGMTEISHVSTAPQGTPGYVDPQYHQNFYLSDKSDVYSFGVVLIEIITALKVVDFTRPPSEVNLAALAIDRIGRGCVDELIDPFLEPNRDAWTLYSVHKVVELAFRCLAFHSDMRPSMTEVAEELESIRRSGWTSMEENFCAASSTGSACSSPRSVSERSISSITIKKAGLLAGLGSQRLIIPPENNHQKDYLPSVEEVMDSSPVSIQDPWLSEQSSPSTNSLLGNVAR 700
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7211307 7214957 + Carg00876-RA Car03g00914 144966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00914 700 Pfam Protein tyrosine and serine/threonine kinase 327 596 IPR001245 GO:0004672|GO:0006468
Car03g00914 700 MobiDBLite consensus disorder prediction 675 700 - -
Car03g00914 700 ProSiteProfiles Protein kinase domain profile. 324 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00914 700 MobiDBLite consensus disorder prediction 677 700 - -
Car03g00914 700 ProSitePatterns Serine/Threonine protein kinases active-site signature. 444 456 IPR008271 GO:0004672|GO:0006468
Car03g00914 700 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00914 Car-Chr3:7211307 Car06g00367 Car-Chr6:2013054 1.35E-94 dispersed
Car08g00145 Car-Chr8:867358 Car03g00914 Car-Chr3:7211307 1.70E-53 transposed
Car12g00472 Car-Chr12:2964459 Car03g00914 Car-Chr3:7211307 0 wgd
Car03g00914 Car-Chr3:7211307 Car05g00176 Car-Chr5:937808 0 wgd
Car03g00914 Car-Chr3:7211307 Car07g00722 Car-Chr7:3720077 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88735 PF07714 PK_Tyr_Ser-Thr 2.00E-44 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00914 - - csv:101222324 1211.05