Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00922 ATGGGAATCGCTAAGGCTCCATTGATTTTCTCCACTAATTCTTCTATGTCCCACCATTTTCATCGTCATCAACTCAAGATTAATCTCCTCCCCCAACAGATCCGCCCTCTCCACTCCTTCGCCGACTCAATTCCGCCGTCTACCGTCGCCGGAACAGACCCACAACTTCATCATGTTTATGCACCTACACCTATTCCCGGGACCATGTTATCAGAAATCTTCAACTTCCCTCCACCTTCTTCCTCTGCCGTCGTTGAATTCTCCGACAATTTCCCAACTTTACGCCCGCCCAACTCCGTTGCGCCCATGCCGCTTTTTCTCATGAACCCTCCTCCGCCACTGCGATCCCCATCGTCACCCTCTACCTCCTCCACTCTCCACATGCTCCTACCCAACCCACATGGGGGTTTTCAAGGCGGTGTTGGCGTTGGAGATCAAGCGGAGTTTGGTCAATTTGTCGTCGAAAGTCGAGGTCTTTCGCTCTCGCTTCATTCGTCGGACAGTGGGGTGAAAGGTGATGAATTGGGAGTTAGGGATGGTGGGGTTTTGTATAGTTATAACAACAACAACAACAATCAAGTCGGGGATGGAGGAAGTGGATCAACATCCTCAATTTTGCAATATTCTTTGAAAAATAATTCAGAGAATTCTCCTCTTGCTTCACAAATTATGAATCCCAATCATCAAGTTCAAATTGGATTTGGGTCATCTTTGGGAGTTGTAAATGTGTTGAGGAATTCAAGATATGTCAAACCCACACAGGAATTACTCGAGGAATTTTGTAGTGTTGGGAAGGTTCAATTCAAGAAGAATAAGTTCAATACTGAAACCACCGCCTCTGCCACCGCCACCGCCGCCGGTGGCTCGTCATCGTCGTCAAAAGTTCAACCTCCCTTATCGGCTGCTGACAGAATCGAACATCAACGGAGAAAGGTTGAACGGAGATACAACCTGTATAGGGAGCAAATGCAAATGGTAGTGAACTCGTTTGACCTGGTGATGGGGTTCGGGGCGGCAGCGCCCTACACAACATTGACGCAGAAGGCGATGTCGAGGCACTTCCGGTGTCTGAAGGACGCGTTAGCAGATCAGTTAAAGCAGAGCTACGAGGCGTTGGGGGAGAAAGGCGGCAATGGAGGCTACGGCGTAACAAAAGGAGAGACCCCAAGATTAAAGCTTCTGGAACAGAGCCTCCGCCAGCAGAGGGCTTTCCATCAAATGGGTATGATGGAACAAGAAGCTTGGAGACCACAGCGTGGCCTCCCTGAACGATCTGTCAGCATTCTCAGAGCTTGGCTCTTCGAGCATTTTCTTCACCCGTACCCCAGCGACGCAGACAAGCTGCTGTTAGCTCGACAGACTGGTTTGTCCAGAAATCAGGTCTCGAATTGGTTCATTAATGCAAGAGTTCGGTTGTGGAAACCAATGGTGGAAGAAATGTACCAACTTGAAGATAAAGTCGAAACAGACCATCATAGTGATCATCAAGGATCAGAAGACAATAACAATCAAACAAAAAACAGTGACATGAATGCACAAAATCCAACACCCACCACTTCCTCTGCTGCTCCACCGCCACCAGCCACCACTGCCGCCGTAACAGCTGCTTTCACGGCGACGCATGAGTACTCAGAGCTTCATGATGTATGGCGACATGGAAGTGGAGATCATCAACATTATGAGACTGTTACAGGGACTGACAACATGAATAATAATCATAGACCAACACTTATAAGGTTTGGCCCTACTGCTACGGCCACCGGTGACGTGTCTCTCACTTTAGGGCTCCGCCACACTGGAAACACCTCCTCCTCCGCCGCCGCCGCCGCAGATAACCCTTCTTTCTTCCTTAGAGACTTTGGTCACTCTTAG 1872 49.04 MGIAKAPLIFSTNSSMSHHFHRHQLKINLLPQQIRPLHSFADSIPPSTVAGTDPQLHHVYAPTPIPGTMLSEIFNFPPPSSSAVVEFSDNFPTLRPPNSVAPMPLFLMNPPPPLRSPSSPSTSSTLHMLLPNPHGGFQGGVGVGDQAEFGQFVVESRGLSLSLHSSDSGVKGDELGVRDGGVLYSYNNNNNNQVGDGGSGSTSSILQYSLKNNSENSPLASQIMNPNHQVQIGFGSSLGVVNVLRNSRYVKPTQELLEEFCSVGKVQFKKNKFNTETTASATATAAGGSSSSSKVQPPLSAADRIEHQRRKVERRYNLYREQMQMVVNSFDLVMGFGAAAPYTTLTQKAMSRHFRCLKDALADQLKQSYEALGEKGGNGGYGVTKGETPRLKLLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVSILRAWLFEHFLHPYPSDADKLLLARQTGLSRNQVSNWFINARVRLWKPMVEEMYQLEDKVETDHHSDHQGSEDNNNQTKNSDMNAQNPTPTTSSAAPPPPATTAAVTAAFTATHEYSELHDVWRHGSGDHQHYETVTGTDNMNNNHRPTLIRFGPTATATGDVSLTLGLRHTGNTSSSAAAAADNPSFFLRDFGHS 623
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7251035 7254765 - Carg00884-RA Car03g00922 144974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00922 623 MobiDBLite consensus disorder prediction 282 304 - -
Car03g00922 623 Pfam Associated with HOX 243 361 IPR006563 -
Car03g00922 623 MobiDBLite consensus disorder prediction 487 531 - -
Car03g00922 623 Pfam Homeobox KN domain 432 471 IPR008422 GO:0003677|GO:0006355
Car03g00922 623 MobiDBLite consensus disorder prediction 500 518 - -
Car03g00922 623 Coils Coil 302 322 - -
Car03g00922 623 MobiDBLite consensus disorder prediction 282 298 - -
Car03g00922 623 ProSiteProfiles 'Homeobox' domain profile. 412 475 IPR001356 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00922 Car-Chr3:7251035 Car20g00129 Car-Chr20:717400 1.38E-80 dispersed
Car02g00391 Car-Chr2:2948817 Car03g00922 Car-Chr3:7251035 2.37E-138 wgd
Car20g00987 Car-Chr20:11517710 Car03g00922 Car-Chr3:7251035 8.44E-125 wgd
Car03g00922 Car-Chr3:7251035 Car07g00733 Car-Chr7:3779080 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3176 PF07526 POX 2.50E-36 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00922 - - bhj:120073177 757.673